STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY40606.1Putative ABC transporter ATP-binding protein. (607 aa)    
Predicted Functional Partners:
yheI_3
Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI.
 
    
0.887
yheI_2
Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI.
 
    
0.844
oppF_4
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
     
0.808
yqjH
NADPH-dependent ferric-chelate reductase.
  
  
 0.802
bioC_3
Malonyl-[acyl-carrier protein] O-methyltransferase.
     
 0.777
yusV_3
Putative siderophore transport system ATP-binding protein YusV.
 
  
 0.764
dnaK_2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.758
OSY40600.1
MbtH-like protein.
     
 0.723
fepG_2
Ferric enterobactin transport system permease protein FepG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.717
yfiZ_2
Putative siderophore transport system permease protein YfiZ precursor; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
     
 0.716
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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