STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqjHNADPH-dependent ferric-chelate reductase. (276 aa)    
Predicted Functional Partners:
yusV_3
Putative siderophore transport system ATP-binding protein YusV.
  
 0.805
yheI_2
Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI.
  
  
 0.802
OSY40606.1
Putative ABC transporter ATP-binding protein.
  
  
 0.802
OSY44045.1
Siderophore-interacting FAD-binding domain protein.
 
    0.794
viuB_6
Vibriobactin utilization protein ViuB.
 
    0.789
OSY40600.1
MbtH-like protein.
 
  
 0.781
bioC_3
Malonyl-[acyl-carrier protein] O-methyltransferase.
       0.773
dhbB_2
Isochorismatase; Overlaps another CDS with the same product name.
  
     0.773
yfiZ_2
Putative siderophore transport system permease protein YfiZ precursor; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.751
fepG_2
Ferric enterobactin transport system permease protein FepG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.737
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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