Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY40620.1 | OSY40621.1 | BG845_02697 | BG845_02698 | Hypothetical protein. | Cupin domain protein. | 0.773 |
OSY40620.1 | bclA_1 | BG845_02697 | BG845_02700 | Hypothetical protein. | Benzoate--CoA ligase. | 0.675 |
OSY40620.1 | namA | BG845_02697 | BG845_02701 | Hypothetical protein. | NADPH dehydrogenase. | 0.675 |
OSY40620.1 | tesB_1 | BG845_02697 | BG845_02699 | Hypothetical protein. | Acyl-CoA thioesterase 2. | 0.773 |
OSY40620.1 | yabJ_3 | BG845_02697 | BG845_02696 | Hypothetical protein. | Enamine/imine deaminase. | 0.541 |
OSY40621.1 | OSY40620.1 | BG845_02698 | BG845_02697 | Cupin domain protein. | Hypothetical protein. | 0.773 |
OSY40621.1 | bclA_1 | BG845_02698 | BG845_02700 | Cupin domain protein. | Benzoate--CoA ligase. | 0.907 |
OSY40621.1 | namA | BG845_02698 | BG845_02701 | Cupin domain protein. | NADPH dehydrogenase. | 0.910 |
OSY40621.1 | paaX_1 | BG845_02698 | BG845_02695 | Cupin domain protein. | Transcriptional repressor PaaX. | 0.553 |
OSY40621.1 | tesB_1 | BG845_02698 | BG845_02699 | Cupin domain protein. | Acyl-CoA thioesterase 2. | 0.889 |
OSY40621.1 | vioD_1 | BG845_02698 | BG845_05644 | Cupin domain protein. | Putative tryptophan hydroxylase VioD. | 0.554 |
OSY40621.1 | vioD_2 | BG845_02698 | BG845_05645 | Cupin domain protein. | Putative tryptophan hydroxylase VioD. | 0.531 |
OSY40621.1 | vioD_3 | BG845_02698 | BG845_06013 | Cupin domain protein. | Putative tryptophan hydroxylase VioD. | 0.488 |
OSY40621.1 | vioD_4 | BG845_02698 | BG845_06736 | Cupin domain protein. | Putative tryptophan hydroxylase VioD. | 0.531 |
OSY40621.1 | yabJ_3 | BG845_02698 | BG845_02696 | Cupin domain protein. | Enamine/imine deaminase. | 0.758 |
bclA_1 | OSY40620.1 | BG845_02700 | BG845_02697 | Benzoate--CoA ligase. | Hypothetical protein. | 0.675 |
bclA_1 | OSY40621.1 | BG845_02700 | BG845_02698 | Benzoate--CoA ligase. | Cupin domain protein. | 0.907 |
bclA_1 | namA | BG845_02700 | BG845_02701 | Benzoate--CoA ligase. | NADPH dehydrogenase. | 0.995 |
bclA_1 | paaX_1 | BG845_02700 | BG845_02695 | Benzoate--CoA ligase. | Transcriptional repressor PaaX. | 0.719 |
bclA_1 | tesB_1 | BG845_02700 | BG845_02699 | Benzoate--CoA ligase. | Acyl-CoA thioesterase 2. | 0.854 |
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