Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
araQ_2 | lacF | BG845_02788 | BG845_05741 | L-arabinose transport system permease protein AraQ. | Lactose transport system permease protein LacF. | 0.917 |
araQ_2 | sugA_1 | BG845_02788 | BG845_01786 | L-arabinose transport system permease protein AraQ. | Trehalose transport system permease protein SugA. | 0.926 |
araQ_2 | sugA_2 | BG845_02788 | BG845_02138 | L-arabinose transport system permease protein AraQ. | Trehalose transport system permease protein SugA. | 0.917 |
araQ_2 | sugC_3 | BG845_02788 | BG845_02786 | L-arabinose transport system permease protein AraQ. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.966 |
araQ_2 | ugpA_1 | BG845_02788 | BG845_01650 | L-arabinose transport system permease protein AraQ. | Sn-glycerol-3-phosphate transport system permease protein UgpA. | 0.925 |
araQ_2 | ugpA_2 | BG845_02788 | BG845_02789 | L-arabinose transport system permease protein AraQ. | Sn-glycerol-3-phosphate transport system permease protein UgpA. | 0.996 |
araQ_2 | ugpB | BG845_02788 | BG845_02787 | L-arabinose transport system permease protein AraQ. | Sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor. | 0.992 |
araQ_2 | ugpC | BG845_02788 | BG845_00644 | L-arabinose transport system permease protein AraQ. | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | 0.915 |
araQ_2 | ycjO | BG845_02788 | BG845_03063 | L-arabinose transport system permease protein AraQ. | Inner membrane ABC transporter permease protein YcjO. | 0.919 |
araQ_2 | yteP | BG845_02788 | BG845_00640 | L-arabinose transport system permease protein AraQ. | Putative multiple-sugar transport system permease YteP. | 0.920 |
lacF | araQ_2 | BG845_05741 | BG845_02788 | Lactose transport system permease protein LacF. | L-arabinose transport system permease protein AraQ. | 0.917 |
lacF | sugC_3 | BG845_05741 | BG845_02786 | Lactose transport system permease protein LacF. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.918 |
lacF | ugpB | BG845_05741 | BG845_02787 | Lactose transport system permease protein LacF. | Sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor. | 0.782 |
lacF | ugpC | BG845_05741 | BG845_00644 | Lactose transport system permease protein LacF. | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | 0.918 |
sugA_1 | araQ_2 | BG845_01786 | BG845_02788 | Trehalose transport system permease protein SugA. | L-arabinose transport system permease protein AraQ. | 0.926 |
sugA_1 | sugC_3 | BG845_01786 | BG845_02786 | Trehalose transport system permease protein SugA. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.963 |
sugA_1 | ugpB | BG845_01786 | BG845_02787 | Trehalose transport system permease protein SugA. | Sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor. | 0.878 |
sugA_1 | ugpC | BG845_01786 | BG845_00644 | Trehalose transport system permease protein SugA. | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | 0.962 |
sugA_2 | araQ_2 | BG845_02138 | BG845_02788 | Trehalose transport system permease protein SugA. | L-arabinose transport system permease protein AraQ. | 0.917 |
sugA_2 | sugC_3 | BG845_02138 | BG845_02786 | Trehalose transport system permease protein SugA. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.980 |
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