Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
gbuA | opuAC | BG845_01813 | BG845_01814 | Glycine betaine/carnitine transport ATP-binding protein GbuA. | Glycine betaine-binding protein OpuAC precursor. | 0.999 |
gbuA | opuBB_2 | BG845_01813 | BG845_02831 | Glycine betaine/carnitine transport ATP-binding protein GbuA. | Choline transport system permease protein OpuBB. | 0.611 |
gbuA | opuCD | BG845_01813 | BG845_02829 | Glycine betaine/carnitine transport ATP-binding protein GbuA. | Carnitine transport permease protein OpuCD. | 0.703 |
opuAC | gbuA | BG845_01814 | BG845_01813 | Glycine betaine-binding protein OpuAC precursor. | Glycine betaine/carnitine transport ATP-binding protein GbuA. | 0.999 |
opuAC | opuBB_2 | BG845_01814 | BG845_02831 | Glycine betaine-binding protein OpuAC precursor. | Choline transport system permease protein OpuBB. | 0.430 |
opuAC | opuCC | BG845_01814 | BG845_02646 | Glycine betaine-binding protein OpuAC precursor. | Glycine betaine/carnitine/choline-binding protein OpuCC precursor. | 0.447 |
opuAC | opuCD | BG845_01814 | BG845_02829 | Glycine betaine-binding protein OpuAC precursor. | Carnitine transport permease protein OpuCD. | 0.516 |
opuAC | osmF_1 | BG845_01814 | BG845_02674 | Glycine betaine-binding protein OpuAC precursor. | Putative osmoprotectant uptake system substrate-binding protein OsmF precursor. | 0.447 |
opuAC | osmF_2 | BG845_01814 | BG845_02827 | Glycine betaine-binding protein OpuAC precursor. | Putative osmoprotectant uptake system substrate-binding protein OsmF precursor. | 0.447 |
opuAC | osmF_3 | BG845_01814 | BG845_02828 | Glycine betaine-binding protein OpuAC precursor. | Putative osmoprotectant uptake system substrate-binding protein OsmF precursor. | 0.447 |
opuBB_2 | gbuA | BG845_02831 | BG845_01813 | Choline transport system permease protein OpuBB. | Glycine betaine/carnitine transport ATP-binding protein GbuA. | 0.611 |
opuBB_2 | opuAC | BG845_02831 | BG845_01814 | Choline transport system permease protein OpuBB. | Glycine betaine-binding protein OpuAC precursor. | 0.430 |
opuBB_2 | opuCA_2 | BG845_02831 | BG845_02643 | Choline transport system permease protein OpuBB. | Carnitine transport ATP-binding protein OpuCA. | 0.987 |
opuBB_2 | opuCA_3 | BG845_02831 | BG845_02830 | Choline transport system permease protein OpuBB. | Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA. | 0.997 |
opuBB_2 | opuCC | BG845_02831 | BG845_02646 | Choline transport system permease protein OpuBB. | Glycine betaine/carnitine/choline-binding protein OpuCC precursor. | 0.997 |
opuBB_2 | opuCD | BG845_02831 | BG845_02829 | Choline transport system permease protein OpuBB. | Carnitine transport permease protein OpuCD. | 0.924 |
opuBB_2 | osmF_1 | BG845_02831 | BG845_02674 | Choline transport system permease protein OpuBB. | Putative osmoprotectant uptake system substrate-binding protein OsmF precursor. | 0.997 |
opuBB_2 | osmF_2 | BG845_02831 | BG845_02827 | Choline transport system permease protein OpuBB. | Putative osmoprotectant uptake system substrate-binding protein OsmF precursor. | 0.998 |
opuBB_2 | osmF_3 | BG845_02831 | BG845_02828 | Choline transport system permease protein OpuBB. | Putative osmoprotectant uptake system substrate-binding protein OsmF precursor. | 0.998 |
opuBB_2 | rutE | BG845_02831 | BG845_00785 | Choline transport system permease protein OpuBB. | Putative malonic semialdehyde reductase RutE. | 0.588 |
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