Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY42215.1 | iclR_2 | BG845_01714 | BG845_02896 | DNA-binding transcriptional repressor AllR. | Acetate operon repressor. | 0.401 |
OSY42215.1 | kdgR_3 | BG845_01714 | BG845_01101 | DNA-binding transcriptional repressor AllR. | Transcriptional regulator KdgR. | 0.440 |
allR | iclR_2 | BG845_03923 | BG845_02896 | HTH-type transcriptional repressor AllR. | Acetate operon repressor. | 0.774 |
iclR_2 | OSY42215.1 | BG845_02896 | BG845_01714 | Acetate operon repressor. | DNA-binding transcriptional repressor AllR. | 0.401 |
iclR_2 | allR | BG845_02896 | BG845_03923 | Acetate operon repressor. | HTH-type transcriptional repressor AllR. | 0.774 |
iclR_2 | kdgR_3 | BG845_02896 | BG845_01101 | Acetate operon repressor. | Transcriptional regulator KdgR. | 0.759 |
iclR_2 | pnpA_1 | BG845_02896 | BG845_02897 | Acetate operon repressor. | Para-nitrophenol 4-monooxygenase. | 0.577 |
iclR_2 | ssuA_1 | BG845_02896 | BG845_02895 | Acetate operon repressor. | Putative aliphatic sulfonates-binding protein precursor. | 0.438 |
kdgR_3 | OSY42215.1 | BG845_01101 | BG845_01714 | Transcriptional regulator KdgR. | DNA-binding transcriptional repressor AllR. | 0.440 |
kdgR_3 | iclR_2 | BG845_01101 | BG845_02896 | Transcriptional regulator KdgR. | Acetate operon repressor. | 0.759 |
pnpA_1 | iclR_2 | BG845_02897 | BG845_02896 | Para-nitrophenol 4-monooxygenase. | Acetate operon repressor. | 0.577 |
ssuA_1 | iclR_2 | BG845_02895 | BG845_02896 | Putative aliphatic sulfonates-binding protein precursor. | Acetate operon repressor. | 0.438 |