STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pnpA_1Para-nitrophenol 4-monooxygenase. (423 aa)    
Predicted Functional Partners:
mhpB
2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase.
 
 
 0.920
xlnD_1
3-hydroxybenzoate 6-hydroxylase 1.
  
     0.580
iclR_2
Acetate operon repressor.
     
 0.577
OSY34773.1
6-hydroxynicotinate 3-monooxygenase precursor.
  
     0.570
xlnD_2
3-hydroxybenzoate 6-hydroxylase 1.
  
     0.564
OSY40075.1
Ureidoglycolate lyase.
  
  
 0.519
kmo
Kynurenine 3-monooxygenase.
  
     0.485
OSY41557.1
6-hydroxynicotinate 3-monooxygenase precursor.
  
     0.458
AmpC_2
Beta-lactamase 2 precursor.
  
 0.456
hpxO_2
FAD-dependent urate hydroxylase.
  
     0.449
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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