Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY40136.1 | OSY40137.1 | BG845_02959 | BG845_02960 | Hypothetical protein. | Hypothetical protein. | 0.773 |
OSY40136.1 | OSY40138.1 | BG845_02959 | BG845_02961 | Hypothetical protein. | Acetamidase/Formamidase family protein. | 0.581 |
OSY40137.1 | OSY40136.1 | BG845_02960 | BG845_02959 | Hypothetical protein. | Hypothetical protein. | 0.773 |
OSY40137.1 | OSY40138.1 | BG845_02960 | BG845_02961 | Hypothetical protein. | Acetamidase/Formamidase family protein. | 0.581 |
OSY40138.1 | OSY40136.1 | BG845_02961 | BG845_02959 | Acetamidase/Formamidase family protein. | Hypothetical protein. | 0.581 |
OSY40138.1 | OSY40137.1 | BG845_02961 | BG845_02960 | Acetamidase/Formamidase family protein. | Hypothetical protein. | 0.581 |
OSY40138.1 | OSY40141.1 | BG845_02961 | BG845_02964 | Acetamidase/Formamidase family protein. | Hypothetical protein. | 0.476 |
OSY40138.1 | OSY42922.1 | BG845_02961 | BG845_01164 | Acetamidase/Formamidase family protein. | Zinc ribbon domain protein. | 0.427 |
OSY40138.1 | amdA_2 | BG845_02961 | BG845_01165 | Acetamidase/Formamidase family protein. | Acetamidase. | 0.528 |
OSY40138.1 | amdA_3 | BG845_02961 | BG845_01166 | Acetamidase/Formamidase family protein. | Acetamidase. | 0.500 |
OSY40138.1 | fgs_1 | BG845_02961 | BG845_02963 | Acetamidase/Formamidase family protein. | Folylpolyglutamate synthase. | 0.476 |
OSY40138.1 | valS | BG845_02961 | BG845_02962 | Acetamidase/Formamidase family protein. | Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.476 |
OSY40141.1 | OSY40138.1 | BG845_02964 | BG845_02961 | Hypothetical protein. | Acetamidase/Formamidase family protein. | 0.476 |
OSY40141.1 | fgs_1 | BG845_02964 | BG845_02963 | Hypothetical protein. | Folylpolyglutamate synthase. | 0.891 |
OSY40141.1 | valS | BG845_02964 | BG845_02962 | Hypothetical protein. | Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.916 |
OSY42922.1 | OSY40138.1 | BG845_01164 | BG845_02961 | Zinc ribbon domain protein. | Acetamidase/Formamidase family protein. | 0.427 |
OSY42922.1 | amdA_2 | BG845_01164 | BG845_01165 | Zinc ribbon domain protein. | Acetamidase. | 0.876 |
OSY42922.1 | amdA_3 | BG845_01164 | BG845_01166 | Zinc ribbon domain protein. | Acetamidase. | 0.860 |
amdA_2 | OSY40138.1 | BG845_01165 | BG845_02961 | Acetamidase. | Acetamidase/Formamidase family protein. | 0.528 |
amdA_2 | OSY42922.1 | BG845_01165 | BG845_01164 | Acetamidase. | Zinc ribbon domain protein. | 0.876 |
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