Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY36817.1 | pytH_3 | BG845_05089 | BG845_02996 | Alpha/beta hydrolase family protein. | Pyrethroid hydrolase. | 0.688 |
OSY40176.1 | OSY40177.1 | BG845_02999 | BG845_03000 | Hypothetical protein. | Hypothetical protein. | 0.792 |
OSY40176.1 | catC_1 | BG845_02999 | BG845_02995 | Hypothetical protein. | Muconolactone Delta-isomerase. | 0.508 |
OSY40176.1 | galB | BG845_02999 | BG845_02998 | Hypothetical protein. | 4-oxalmesaconate hydratase. | 0.508 |
OSY40176.1 | oppD_4 | BG845_02999 | BG845_03001 | Hypothetical protein. | Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. | 0.773 |
OSY40176.1 | proA_5 | BG845_02999 | BG845_02997 | Hypothetical protein. | 4-hydroxy-4-methyl-2-oxoglutarate aldolase. | 0.508 |
OSY40176.1 | pytH_3 | BG845_02999 | BG845_02996 | Hypothetical protein. | Pyrethroid hydrolase. | 0.508 |
OSY40177.1 | OSY40176.1 | BG845_03000 | BG845_02999 | Hypothetical protein. | Hypothetical protein. | 0.792 |
OSY40177.1 | catC_1 | BG845_03000 | BG845_02995 | Hypothetical protein. | Muconolactone Delta-isomerase. | 0.508 |
OSY40177.1 | galB | BG845_03000 | BG845_02998 | Hypothetical protein. | 4-oxalmesaconate hydratase. | 0.509 |
OSY40177.1 | oppD_4 | BG845_03000 | BG845_03001 | Hypothetical protein. | Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. | 0.773 |
OSY40177.1 | proA_5 | BG845_03000 | BG845_02997 | Hypothetical protein. | 4-hydroxy-4-methyl-2-oxoglutarate aldolase. | 0.572 |
OSY40177.1 | pytH_3 | BG845_03000 | BG845_02996 | Hypothetical protein. | Pyrethroid hydrolase. | 0.602 |
OSY43521.1 | pytH_3 | BG845_00464 | BG845_02996 | Alpha/beta hydrolase family protein. | Pyrethroid hydrolase. | 0.616 |
catC_1 | OSY40176.1 | BG845_02995 | BG845_02999 | Muconolactone Delta-isomerase. | Hypothetical protein. | 0.508 |
catC_1 | OSY40177.1 | BG845_02995 | BG845_03000 | Muconolactone Delta-isomerase. | Hypothetical protein. | 0.508 |
catC_1 | galB | BG845_02995 | BG845_02998 | Muconolactone Delta-isomerase. | 4-oxalmesaconate hydratase. | 0.773 |
catC_1 | oppD_4 | BG845_02995 | BG845_03001 | Muconolactone Delta-isomerase. | Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. | 0.508 |
catC_1 | proA_5 | BG845_02995 | BG845_02997 | Muconolactone Delta-isomerase. | 4-hydroxy-4-methyl-2-oxoglutarate aldolase. | 0.785 |
catC_1 | pytH_3 | BG845_02995 | BG845_02996 | Muconolactone Delta-isomerase. | Pyrethroid hydrolase. | 0.840 |
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