Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MarR_2 | OSY39081.1 | BG845_00462 | BG845_03650 | DNA-binding transcriptional repressor MarR. | Hypothetical protein. | 0.713 |
MarR_2 | OSY41777.1 | BG845_00462 | BG845_01805 | DNA-binding transcriptional repressor MarR. | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | 0.644 |
MarR_2 | cobB_1 | BG845_00462 | BG845_03025 | DNA-binding transcriptional repressor MarR. | NAD-dependent protein deacylase. | 0.689 |
MarR_2 | lytR_1 | BG845_00462 | BG845_00584 | DNA-binding transcriptional repressor MarR. | Transcriptional regulator LytR. | 0.676 |
MarR_2 | yodB_2 | BG845_00462 | BG845_05693 | DNA-binding transcriptional repressor MarR. | HTH-type transcriptional regulator YodB. | 0.770 |
MarR_2 | ywtF | BG845_00462 | BG845_01526 | DNA-binding transcriptional repressor MarR. | Putative transcriptional regulator YwtF. | 0.676 |
OSY39081.1 | MarR_2 | BG845_03650 | BG845_00462 | Hypothetical protein. | DNA-binding transcriptional repressor MarR. | 0.713 |
OSY39081.1 | OSY41777.1 | BG845_03650 | BG845_01805 | Hypothetical protein. | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | 0.768 |
OSY39081.1 | cobB_1 | BG845_03650 | BG845_03025 | Hypothetical protein. | NAD-dependent protein deacylase. | 0.654 |
OSY39081.1 | lytR_1 | BG845_03650 | BG845_00584 | Hypothetical protein. | Transcriptional regulator LytR. | 0.727 |
OSY39081.1 | yodB_2 | BG845_03650 | BG845_05693 | Hypothetical protein. | HTH-type transcriptional regulator YodB. | 0.761 |
OSY39081.1 | ywtF | BG845_03650 | BG845_01526 | Hypothetical protein. | Putative transcriptional regulator YwtF. | 0.770 |
OSY41777.1 | MarR_2 | BG845_01805 | BG845_00462 | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | DNA-binding transcriptional repressor MarR. | 0.644 |
OSY41777.1 | OSY39081.1 | BG845_01805 | BG845_03650 | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.768 |
OSY41777.1 | cobB_1 | BG845_01805 | BG845_03025 | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | NAD-dependent protein deacylase. | 0.660 |
OSY41777.1 | ideR_2 | BG845_01805 | BG845_06477 | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | Iron-dependent repressor IdeR. | 0.722 |
OSY41777.1 | lytR_1 | BG845_01805 | BG845_00584 | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator LytR. | 0.690 |
OSY41777.1 | yodB_2 | BG845_01805 | BG845_05693 | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | HTH-type transcriptional regulator YodB. | 0.763 |
OSY41777.1 | ywtF | BG845_01805 | BG845_01526 | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | Putative transcriptional regulator YwtF. | 0.690 |
cobB_1 | MarR_2 | BG845_03025 | BG845_00462 | NAD-dependent protein deacylase. | DNA-binding transcriptional repressor MarR. | 0.689 |
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