Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY36558.1 | OSY42364.1 | BG845_05325 | BG845_01284 | Blue-light-activated histidine kinase. | EAL domain protein. | 0.957 |
OSY36558.1 | glnL | BG845_05325 | BG845_03266 | Blue-light-activated histidine kinase. | Nitrogen regulation protein NR(II). | 0.719 |
OSY36558.1 | pdhS | BG845_05325 | BG845_06114 | Blue-light-activated histidine kinase. | Cell-division control histidine kinase PdhS. | 0.968 |
OSY36558.1 | tmoS | BG845_05325 | BG845_06123 | Blue-light-activated histidine kinase. | Sensor histidine kinase TmoS. | 0.983 |
OSY36558.1 | trxB_4 | BG845_05325 | BG845_03267 | Blue-light-activated histidine kinase. | Thioredoxin reductase. | 0.868 |
OSY38387.1 | glnL | BG845_04148 | BG845_03266 | D-ribose transporter subunit RbsB. | Nitrogen regulation protein NR(II). | 0.512 |
OSY38387.1 | pdhS | BG845_04148 | BG845_06114 | D-ribose transporter subunit RbsB. | Cell-division control histidine kinase PdhS. | 0.686 |
OSY38387.1 | tmoS | BG845_04148 | BG845_06123 | D-ribose transporter subunit RbsB. | Sensor histidine kinase TmoS. | 0.670 |
OSY38387.1 | trxB_4 | BG845_04148 | BG845_03267 | D-ribose transporter subunit RbsB. | Thioredoxin reductase. | 0.906 |
OSY42364.1 | OSY36558.1 | BG845_01284 | BG845_05325 | EAL domain protein. | Blue-light-activated histidine kinase. | 0.957 |
OSY42364.1 | glnL | BG845_01284 | BG845_03266 | EAL domain protein. | Nitrogen regulation protein NR(II). | 0.586 |
OSY42364.1 | pdhS | BG845_01284 | BG845_06114 | EAL domain protein. | Cell-division control histidine kinase PdhS. | 0.912 |
OSY42364.1 | tmoS | BG845_01284 | BG845_06123 | EAL domain protein. | Sensor histidine kinase TmoS. | 0.982 |
OSY42364.1 | trxB_4 | BG845_01284 | BG845_03267 | EAL domain protein. | Thioredoxin reductase. | 0.841 |
csd_2 | trxB_4 | BG845_03646 | BG845_03267 | Putative cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | Thioredoxin reductase. | 0.914 |
glnL | OSY36558.1 | BG845_03266 | BG845_05325 | Nitrogen regulation protein NR(II). | Blue-light-activated histidine kinase. | 0.719 |
glnL | OSY38387.1 | BG845_03266 | BG845_04148 | Nitrogen regulation protein NR(II). | D-ribose transporter subunit RbsB. | 0.512 |
glnL | OSY42364.1 | BG845_03266 | BG845_01284 | Nitrogen regulation protein NR(II). | EAL domain protein. | 0.586 |
glnL | pdhS | BG845_03266 | BG845_06114 | Nitrogen regulation protein NR(II). | Cell-division control histidine kinase PdhS. | 0.845 |
glnL | tmoS | BG845_03266 | BG845_06123 | Nitrogen regulation protein NR(II). | Sensor histidine kinase TmoS. | 0.981 |
page 1 of 3