Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY35078.1 | OSY39486.1 | BG845_06311 | BG845_03432 | AAA-like domain protein; Overlaps another CDS with the same product name. | Major Facilitator Superfamily protein. | 0.468 |
OSY39087.1 | OSY39486.1 | BG845_03656 | BG845_03432 | Hypothetical protein. | Major Facilitator Superfamily protein. | 0.420 |
OSY39455.1 | OSY39486.1 | BG845_03400 | BG845_03432 | Hypothetical protein. | Major Facilitator Superfamily protein. | 0.567 |
OSY39478.1 | OSY39486.1 | BG845_03424 | BG845_03432 | DNA-binding transcriptional repressor FabR. | Major Facilitator Superfamily protein. | 0.460 |
OSY39486.1 | OSY35078.1 | BG845_03432 | BG845_06311 | Major Facilitator Superfamily protein. | AAA-like domain protein; Overlaps another CDS with the same product name. | 0.468 |
OSY39486.1 | OSY39087.1 | BG845_03432 | BG845_03656 | Major Facilitator Superfamily protein. | Hypothetical protein. | 0.420 |
OSY39486.1 | OSY39455.1 | BG845_03432 | BG845_03400 | Major Facilitator Superfamily protein. | Hypothetical protein. | 0.567 |
OSY39486.1 | OSY39478.1 | BG845_03432 | BG845_03424 | Major Facilitator Superfamily protein. | DNA-binding transcriptional repressor FabR. | 0.460 |
OSY39486.1 | OSY39487.1 | BG845_03432 | BG845_03433 | Major Facilitator Superfamily protein. | Hypothetical protein. | 0.572 |
OSY39486.1 | OSY40694.1 | BG845_03432 | BG845_02452 | Major Facilitator Superfamily protein. | Hypothetical protein. | 0.422 |
OSY39486.1 | OSY42038.1 | BG845_03432 | BG845_01534 | Major Facilitator Superfamily protein. | Helix-turn-helix domain protein. | 0.439 |
OSY39486.1 | Pgi_2 | BG845_03432 | BG845_03667 | Major Facilitator Superfamily protein. | Bifunctional transaldolase/phosoglucose isomerase. | 0.493 |
OSY39486.1 | arsC | BG845_03432 | BG845_03430 | Major Facilitator Superfamily protein. | Arsenate reductase; Belongs to the ArsC family. | 0.557 |
OSY39486.1 | katA | BG845_03432 | BG845_03431 | Major Facilitator Superfamily protein. | Catalase. | 0.562 |
OSY39487.1 | OSY39486.1 | BG845_03433 | BG845_03432 | Hypothetical protein. | Major Facilitator Superfamily protein. | 0.572 |
OSY39487.1 | arsC | BG845_03433 | BG845_03430 | Hypothetical protein. | Arsenate reductase; Belongs to the ArsC family. | 0.401 |
OSY39487.1 | katA | BG845_03433 | BG845_03431 | Hypothetical protein. | Catalase. | 0.401 |
OSY40694.1 | OSY39486.1 | BG845_02452 | BG845_03432 | Hypothetical protein. | Major Facilitator Superfamily protein. | 0.422 |
OSY42038.1 | OSY39486.1 | BG845_01534 | BG845_03432 | Helix-turn-helix domain protein. | Major Facilitator Superfamily protein. | 0.439 |
Pgi_2 | OSY39486.1 | BG845_03667 | BG845_03432 | Bifunctional transaldolase/phosoglucose isomerase. | Major Facilitator Superfamily protein. | 0.493 |
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