Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY39218.1 | OSY39222.1 | BG845_03488 | BG845_03492 | Amidohydrolase. | Long-chain-fatty-acid--CoA ligase FadD13. | 0.742 |
OSY39218.1 | acsA_6 | BG845_03488 | BG845_03490 | Amidohydrolase. | Acetyl-coenzyme A synthetase. | 0.716 |
OSY39218.1 | hosA_1 | BG845_03488 | BG845_03493 | Amidohydrolase. | Transcriptional regulator HosA. | 0.556 |
OSY39218.1 | lcdH_3 | BG845_03488 | BG845_03489 | Amidohydrolase. | L-carnitine dehydrogenase. | 0.702 |
OSY39218.1 | paaF_3 | BG845_03488 | BG845_03491 | Amidohydrolase. | 2,3-dehydroadipyl-CoA hydratase. | 0.904 |
OSY39222.1 | OSY39218.1 | BG845_03492 | BG845_03488 | Long-chain-fatty-acid--CoA ligase FadD13. | Amidohydrolase. | 0.742 |
OSY39222.1 | acsA_6 | BG845_03492 | BG845_03490 | Long-chain-fatty-acid--CoA ligase FadD13. | Acetyl-coenzyme A synthetase. | 0.858 |
OSY39222.1 | hosA_1 | BG845_03492 | BG845_03493 | Long-chain-fatty-acid--CoA ligase FadD13. | Transcriptional regulator HosA. | 0.598 |
OSY39222.1 | lcdH_3 | BG845_03492 | BG845_03489 | Long-chain-fatty-acid--CoA ligase FadD13. | L-carnitine dehydrogenase. | 0.832 |
OSY39222.1 | paaF_3 | BG845_03492 | BG845_03491 | Long-chain-fatty-acid--CoA ligase FadD13. | 2,3-dehydroadipyl-CoA hydratase. | 0.830 |
acsA_6 | OSY39218.1 | BG845_03490 | BG845_03488 | Acetyl-coenzyme A synthetase. | Amidohydrolase. | 0.716 |
acsA_6 | OSY39222.1 | BG845_03490 | BG845_03492 | Acetyl-coenzyme A synthetase. | Long-chain-fatty-acid--CoA ligase FadD13. | 0.858 |
acsA_6 | hosA_1 | BG845_03490 | BG845_03493 | Acetyl-coenzyme A synthetase. | Transcriptional regulator HosA. | 0.611 |
acsA_6 | lcdH_3 | BG845_03490 | BG845_03489 | Acetyl-coenzyme A synthetase. | L-carnitine dehydrogenase. | 0.847 |
acsA_6 | paaF_3 | BG845_03490 | BG845_03491 | Acetyl-coenzyme A synthetase. | 2,3-dehydroadipyl-CoA hydratase. | 0.836 |
acsA_6 | yhjE_7 | BG845_03490 | BG845_03494 | Acetyl-coenzyme A synthetase. | Inner membrane metabolite transport protein YhjE. | 0.414 |
hosA_1 | OSY39218.1 | BG845_03493 | BG845_03488 | Transcriptional regulator HosA. | Amidohydrolase. | 0.556 |
hosA_1 | OSY39222.1 | BG845_03493 | BG845_03492 | Transcriptional regulator HosA. | Long-chain-fatty-acid--CoA ligase FadD13. | 0.598 |
hosA_1 | acsA_6 | BG845_03493 | BG845_03490 | Transcriptional regulator HosA. | Acetyl-coenzyme A synthetase. | 0.611 |
hosA_1 | lcdH_3 | BG845_03493 | BG845_03489 | Transcriptional regulator HosA. | L-carnitine dehydrogenase. | 0.621 |
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