STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmuVHemin import ATP-binding protein HmuV. (259 aa)    
Predicted Functional Partners:
hmuU_4
Hemin transport system permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.975
btuF_2
Vitamin B12-binding protein precursor.
 
 0.960
hmuU_1
Hemin transport system permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.892
hmuU_2
Hemin transport system permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.889
OSY37754.1
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.887
fepD_2
Ferric enterobactin transport system permease protein FepD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.880
yfiZ_1
Putative siderophore transport system permease protein YfiZ precursor; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.873
fecD
Fe(3+) dicitrate transport system permease protein FecD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.872
yfhA_1
Putative siderophore transport system permease protein YfhA; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.868
fepD_1
Ferric enterobactin transport system permease protein FepD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.868
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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