STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY39291.1Hypothetical protein. (96 aa)    
Predicted Functional Partners:
cfp6
Low molecular weight protein antigen 6.
  
     0.761
OSY40141.1
Hypothetical protein.
  
     0.755
OSY41282.1
Hypothetical protein.
  
     0.753
OSY37298.1
3'-5' exoribonuclease; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.753
OSY43677.1
Hypothetical protein.
  
     0.741
OSY35419.1
Hypothetical protein.
  
     0.741
OSY41541.1
Hypothetical protein.
  
     0.712
OSY41077.1
Intracellular chorismate mutase.
  
     0.701
OSY42371.1
Hypothetical protein.
  
     0.697
OSY39401.1
Hypothetical protein.
  
     0.687
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.