STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY39327.1Hypothetical protein. (476 aa)    
Predicted Functional Partners:
uvrD2
ATP-dependent DNA helicase UvrD2.
  
 
 0.809
OSY37462.1
AAA-like domain protein.
 
   
 0.777
OSY39305.1
AAA-like domain protein.
 
   
 0.776
OSY37463.1
TraM recognition site of TraD and TraG.
 
   
 0.775
OSY39328.1
Hypothetical protein.
       0.773
OSY39306.1
TraM recognition site of TraD and TraG.
 
   
 0.772
OSY39304.1
Hypothetical protein.
  
     0.765
OSY37461.1
Hypothetical protein.
  
     0.764
OSY36028.1
ParB-like nuclease domain protein.
 
  
 0.758
OSY39303.1
Hypothetical protein.
  
     0.755
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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