Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fdx | bioI_1 | BG845_02507 | BG845_02568 | Ferredoxin-6. | Biotin biosynthesis cytochrome P450. | 0.612 |
Fdx | bioI_2 | BG845_02507 | BG845_03629 | Ferredoxin-6. | Biotin biosynthesis cytochrome P450. | 0.678 |
OSY34374.1 | bioI_2 | BG845_06924 | BG845_03629 | Hypothetical protein. | Biotin biosynthesis cytochrome P450. | 0.536 |
OSY34374.1 | lcfB_16 | BG845_06924 | BG845_04165 | Hypothetical protein. | Long-chain-fatty-acid--CoA ligase. | 0.966 |
OSY34374.1 | mbtB | BG845_06924 | BG845_02593 | Hypothetical protein. | Phenyloxazoline synthase MbtB. | 0.757 |
bioI_1 | Fdx | BG845_02568 | BG845_02507 | Biotin biosynthesis cytochrome P450. | Ferredoxin-6. | 0.612 |
bioI_1 | bioI_2 | BG845_02568 | BG845_03629 | Biotin biosynthesis cytochrome P450. | Biotin biosynthesis cytochrome P450. | 0.597 |
bioI_1 | lcfB_16 | BG845_02568 | BG845_04165 | Biotin biosynthesis cytochrome P450. | Long-chain-fatty-acid--CoA ligase. | 0.706 |
bioI_1 | mbtB | BG845_02568 | BG845_02593 | Biotin biosynthesis cytochrome P450. | Phenyloxazoline synthase MbtB. | 0.931 |
bioI_1 | pobB_3 | BG845_02568 | BG845_02912 | Biotin biosynthesis cytochrome P450. | Phenoxybenzoate dioxygenase subunit beta. | 0.488 |
bioI_1 | pobB_4 | BG845_02568 | BG845_03628 | Biotin biosynthesis cytochrome P450. | Phenoxybenzoate dioxygenase subunit beta. | 0.488 |
bioI_1 | pobB_7 | BG845_02568 | BG845_05537 | Biotin biosynthesis cytochrome P450. | Phenoxybenzoate dioxygenase subunit beta. | 0.488 |
bioI_1 | polA_1 | BG845_02568 | BG845_01773 | Biotin biosynthesis cytochrome P450. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.617 |
bioI_2 | Fdx | BG845_03629 | BG845_02507 | Biotin biosynthesis cytochrome P450. | Ferredoxin-6. | 0.678 |
bioI_2 | OSY34374.1 | BG845_03629 | BG845_06924 | Biotin biosynthesis cytochrome P450. | Hypothetical protein. | 0.536 |
bioI_2 | bioI_1 | BG845_03629 | BG845_02568 | Biotin biosynthesis cytochrome P450. | Biotin biosynthesis cytochrome P450. | 0.597 |
bioI_2 | lcfB_16 | BG845_03629 | BG845_04165 | Biotin biosynthesis cytochrome P450. | Long-chain-fatty-acid--CoA ligase. | 0.706 |
bioI_2 | mbtB | BG845_03629 | BG845_02593 | Biotin biosynthesis cytochrome P450. | Phenyloxazoline synthase MbtB. | 0.931 |
bioI_2 | pobA | BG845_03629 | BG845_05305 | Biotin biosynthesis cytochrome P450. | P-hydroxybenzoate hydroxylase. | 0.923 |
bioI_2 | pobB_3 | BG845_03629 | BG845_02912 | Biotin biosynthesis cytochrome P450. | Phenoxybenzoate dioxygenase subunit beta. | 0.536 |
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