Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY38857.1 | dmoA_1 | BG845_03729 | BG845_03728 | Cytochrome P450 107B1. | Dimethyl-sulfide monooxygenase. | 0.779 |
OSY38857.1 | naaB | BG845_03729 | BG845_03731 | Cytochrome P450 107B1. | 5-nitrosalicylic acid 1,2-dioxygenase. | 0.609 |
OSY38857.1 | subB_1 | BG845_03729 | BG845_03730 | Cytochrome P450 107B1. | Ferredoxin-2. | 0.797 |
OSY38857.1 | yhjE_8 | BG845_03729 | BG845_03727 | Cytochrome P450 107B1. | Inner membrane metabolite transport protein YhjE. | 0.773 |
dmoA_1 | OSY38857.1 | BG845_03728 | BG845_03729 | Dimethyl-sulfide monooxygenase. | Cytochrome P450 107B1. | 0.779 |
dmoA_1 | naaB | BG845_03728 | BG845_03731 | Dimethyl-sulfide monooxygenase. | 5-nitrosalicylic acid 1,2-dioxygenase. | 0.589 |
dmoA_1 | subB_1 | BG845_03728 | BG845_03730 | Dimethyl-sulfide monooxygenase. | Ferredoxin-2. | 0.773 |
dmoA_1 | yhjE_8 | BG845_03728 | BG845_03727 | Dimethyl-sulfide monooxygenase. | Inner membrane metabolite transport protein YhjE. | 0.773 |
naaB | OSY38857.1 | BG845_03731 | BG845_03729 | 5-nitrosalicylic acid 1,2-dioxygenase. | Cytochrome P450 107B1. | 0.609 |
naaB | dmoA_1 | BG845_03731 | BG845_03728 | 5-nitrosalicylic acid 1,2-dioxygenase. | Dimethyl-sulfide monooxygenase. | 0.589 |
naaB | subB_1 | BG845_03731 | BG845_03730 | 5-nitrosalicylic acid 1,2-dioxygenase. | Ferredoxin-2. | 0.588 |
naaB | yhjE_8 | BG845_03731 | BG845_03727 | 5-nitrosalicylic acid 1,2-dioxygenase. | Inner membrane metabolite transport protein YhjE. | 0.602 |
subB_1 | OSY38857.1 | BG845_03730 | BG845_03729 | Ferredoxin-2. | Cytochrome P450 107B1. | 0.797 |
subB_1 | dmoA_1 | BG845_03730 | BG845_03728 | Ferredoxin-2. | Dimethyl-sulfide monooxygenase. | 0.773 |
subB_1 | naaB | BG845_03730 | BG845_03731 | Ferredoxin-2. | 5-nitrosalicylic acid 1,2-dioxygenase. | 0.588 |
subB_1 | yhjE_8 | BG845_03730 | BG845_03727 | Ferredoxin-2. | Inner membrane metabolite transport protein YhjE. | 0.773 |
yhjE_8 | OSY38857.1 | BG845_03727 | BG845_03729 | Inner membrane metabolite transport protein YhjE. | Cytochrome P450 107B1. | 0.773 |
yhjE_8 | dmoA_1 | BG845_03727 | BG845_03728 | Inner membrane metabolite transport protein YhjE. | Dimethyl-sulfide monooxygenase. | 0.773 |
yhjE_8 | naaB | BG845_03727 | BG845_03731 | Inner membrane metabolite transport protein YhjE. | 5-nitrosalicylic acid 1,2-dioxygenase. | 0.602 |
yhjE_8 | subB_1 | BG845_03727 | BG845_03730 | Inner membrane metabolite transport protein YhjE. | Ferredoxin-2. | 0.773 |