STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnRPutative transcriptional regulator of 2-aminoethylphosphonate degradation operons. (238 aa)    
Predicted Functional Partners:
OSY38917.1
Permease for cytosine/purines, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
 
    0.917
draG
ADP-ribosyl-[dinitrogen reductase] glycohydrolase.
 
    0.914
rbsK_1
Ribokinase.
 
   
 0.896
yvoA_1
HTH-type transcriptional repressor YvoA.
  
     0.763
gmuR
HTH-type transcriptional regulator GmuR.
  
     0.757
yvoA_2
HTH-type transcriptional repressor YvoA.
  
     0.754
yegW
Putative HTH-type transcriptional regulator YegW.
  
     0.740
yvoA_5
HTH-type transcriptional repressor YvoA.
  
     0.730
yvoA_6
HTH-type transcriptional repressor YvoA.
  
     0.680
nagA
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.491
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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