Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY38683.1 | OSY38685.1 | BG845_03885 | BG845_03887 | MarR family protein. | Zinc ribbon domain protein. | 0.430 |
OSY38683.1 | amiC_6 | BG845_03885 | BG845_03886 | MarR family protein. | Aliphatic amidase expression-regulating protein. | 0.854 |
OSY38683.1 | ureI | BG845_03885 | BG845_03889 | MarR family protein. | Acid-activated urea channel. | 0.405 |
OSY38685.1 | OSY38683.1 | BG845_03887 | BG845_03885 | Zinc ribbon domain protein. | MarR family protein. | 0.430 |
OSY38685.1 | amdA_4 | BG845_03887 | BG845_03888 | Zinc ribbon domain protein. | Acetamidase. | 0.534 |
OSY38685.1 | amiC_6 | BG845_03887 | BG845_03886 | Zinc ribbon domain protein. | Aliphatic amidase expression-regulating protein. | 0.568 |
OSY38685.1 | ureI | BG845_03887 | BG845_03889 | Zinc ribbon domain protein. | Acid-activated urea channel. | 0.513 |
amdA_4 | OSY38685.1 | BG845_03888 | BG845_03887 | Acetamidase. | Zinc ribbon domain protein. | 0.534 |
amdA_4 | amiC_6 | BG845_03888 | BG845_03886 | Acetamidase. | Aliphatic amidase expression-regulating protein. | 0.535 |
amdA_4 | ureI | BG845_03888 | BG845_03889 | Acetamidase. | Acid-activated urea channel. | 0.917 |
amiC_6 | OSY38683.1 | BG845_03886 | BG845_03885 | Aliphatic amidase expression-regulating protein. | MarR family protein. | 0.854 |
amiC_6 | OSY38685.1 | BG845_03886 | BG845_03887 | Aliphatic amidase expression-regulating protein. | Zinc ribbon domain protein. | 0.568 |
amiC_6 | amdA_4 | BG845_03886 | BG845_03888 | Aliphatic amidase expression-regulating protein. | Acetamidase. | 0.535 |
amiC_6 | ureI | BG845_03886 | BG845_03889 | Aliphatic amidase expression-regulating protein. | Acid-activated urea channel. | 0.592 |
ureI | OSY38683.1 | BG845_03889 | BG845_03885 | Acid-activated urea channel. | MarR family protein. | 0.405 |
ureI | OSY38685.1 | BG845_03889 | BG845_03887 | Acid-activated urea channel. | Zinc ribbon domain protein. | 0.513 |
ureI | amdA_4 | BG845_03889 | BG845_03888 | Acid-activated urea channel. | Acetamidase. | 0.917 |
ureI | amiC_6 | BG845_03889 | BG845_03886 | Acid-activated urea channel. | Aliphatic amidase expression-regulating protein. | 0.592 |