Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY37978.1 | OSY38750.1 | BG845_04385 | BG845_03953 | Hypothetical protein. | Hypothetical protein. | 0.773 |
OSY37978.1 | OSY38763.1 | BG845_04385 | BG845_03966 | Hypothetical protein. | Hypothetical protein. | 0.798 |
OSY37978.1 | OSY39608.1 | BG845_04385 | BG845_03205 | Hypothetical protein. | Hypothetical protein. | 0.775 |
OSY37978.1 | OSY42470.1 | BG845_04385 | BG845_01390 | Hypothetical protein. | Hypothetical protein. | 0.783 |
OSY37978.1 | OSY44002.1 | BG845_04385 | BG845_00122 | Hypothetical protein. | Hypothetical protein. | 0.770 |
OSY37978.1 | smc_6 | BG845_04385 | BG845_04672 | Hypothetical protein. | Chromosome partition protein Smc. | 0.808 |
OSY38750.1 | OSY37978.1 | BG845_03953 | BG845_04385 | Hypothetical protein. | Hypothetical protein. | 0.773 |
OSY38750.1 | OSY38763.1 | BG845_03953 | BG845_03966 | Hypothetical protein. | Hypothetical protein. | 0.766 |
OSY38750.1 | OSY39608.1 | BG845_03953 | BG845_03205 | Hypothetical protein. | Hypothetical protein. | 0.774 |
OSY38750.1 | OSY42470.1 | BG845_03953 | BG845_01390 | Hypothetical protein. | Hypothetical protein. | 0.774 |
OSY38750.1 | OSY44002.1 | BG845_03953 | BG845_00122 | Hypothetical protein. | Hypothetical protein. | 0.769 |
OSY38750.1 | smc_6 | BG845_03953 | BG845_04672 | Hypothetical protein. | Chromosome partition protein Smc. | 0.769 |
OSY38763.1 | OSY37978.1 | BG845_03966 | BG845_04385 | Hypothetical protein. | Hypothetical protein. | 0.798 |
OSY38763.1 | OSY38750.1 | BG845_03966 | BG845_03953 | Hypothetical protein. | Hypothetical protein. | 0.766 |
OSY38763.1 | OSY39608.1 | BG845_03966 | BG845_03205 | Hypothetical protein. | Hypothetical protein. | 0.773 |
OSY38763.1 | OSY42470.1 | BG845_03966 | BG845_01390 | Hypothetical protein. | Hypothetical protein. | 0.807 |
OSY38763.1 | OSY44002.1 | BG845_03966 | BG845_00122 | Hypothetical protein. | Hypothetical protein. | 0.769 |
OSY38763.1 | aspS | BG845_03966 | BG845_01752 | Hypothetical protein. | Aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.821 |
OSY38763.1 | gpmA_2 | BG845_03966 | BG845_03968 | Hypothetical protein. | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase. | 0.788 |
OSY38763.1 | hisG | BG845_03966 | BG845_01991 | Hypothetical protein. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily. | 0.784 |
page 1 of 3