STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mphPPhenol hydroxylase P5 protein. (342 aa)    
Predicted Functional Partners:
OSY38337.1
Cytochrome P450-pinF2, plant-inducible.
 
 0.995
pyrD
Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.957
OSY44099.1
NADH oxidase.
  
 0.933
stcD
Putative N-methylproline demethylase.
  
 0.933
fprA_1
NADPH-ferredoxin reductase FprA.
  
 0.926
pcpB_2
Pentachlorophenol 4-monooxygenase.
   
 
 0.908
gltB_1
Glutamate synthase [NADPH] small chain.
  
 0.902
fprA_2
NADPH-ferredoxin reductase FprA.
  
 0.902
fprA_3
NADPH-ferredoxin reductase FprA.
  
 0.902
fprA_4
NADPH-ferredoxin reductase FprA.
  
 0.902
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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