Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY38345.1 | nlhH_2 | BG845_04106 | BG845_04104 | Putative HTH-type transcriptional regulator/MT0914. | Carboxylesterase NlhH. | 0.514 |
OSY38345.1 | pamO_3 | BG845_04106 | BG845_04105 | Putative HTH-type transcriptional regulator/MT0914. | Phenylacetone monooxygenase. | 0.604 |
hapE_1 | lcfB_16 | BG845_03517 | BG845_04165 | 4-hydroxyacetophenone monooxygenase. | Long-chain-fatty-acid--CoA ligase. | 0.416 |
hapE_1 | nlhH_2 | BG845_03517 | BG845_04104 | 4-hydroxyacetophenone monooxygenase. | Carboxylesterase NlhH. | 0.726 |
hapE_2 | lcfB_16 | BG845_04382 | BG845_04165 | 4-hydroxyacetophenone monooxygenase. | Long-chain-fatty-acid--CoA ligase. | 0.416 |
hapE_2 | nlhH_2 | BG845_04382 | BG845_04104 | 4-hydroxyacetophenone monooxygenase. | Carboxylesterase NlhH. | 0.559 |
hapE_4 | lcfB_16 | BG845_06134 | BG845_04165 | 4-hydroxyacetophenone monooxygenase. | Long-chain-fatty-acid--CoA ligase. | 0.416 |
hapE_4 | nlhH_2 | BG845_06134 | BG845_04104 | 4-hydroxyacetophenone monooxygenase. | Carboxylesterase NlhH. | 0.615 |
lcfB_16 | hapE_1 | BG845_04165 | BG845_03517 | Long-chain-fatty-acid--CoA ligase. | 4-hydroxyacetophenone monooxygenase. | 0.416 |
lcfB_16 | hapE_2 | BG845_04165 | BG845_04382 | Long-chain-fatty-acid--CoA ligase. | 4-hydroxyacetophenone monooxygenase. | 0.416 |
lcfB_16 | hapE_4 | BG845_04165 | BG845_06134 | Long-chain-fatty-acid--CoA ligase. | 4-hydroxyacetophenone monooxygenase. | 0.416 |
lcfB_16 | lipF | BG845_04165 | BG845_01771 | Long-chain-fatty-acid--CoA ligase. | Carboxylesterase LipF. | 0.593 |
lcfB_16 | nlhH_2 | BG845_04165 | BG845_04104 | Long-chain-fatty-acid--CoA ligase. | Carboxylesterase NlhH. | 0.593 |
lcfB_16 | pamO_1 | BG845_04165 | BG845_03348 | Long-chain-fatty-acid--CoA ligase. | Phenylacetone monooxygenase. | 0.416 |
lcfB_16 | pamO_2 | BG845_04165 | BG845_03978 | Long-chain-fatty-acid--CoA ligase. | Phenylacetone monooxygenase. | 0.416 |
lcfB_16 | pamO_3 | BG845_04165 | BG845_04105 | Long-chain-fatty-acid--CoA ligase. | Phenylacetone monooxygenase. | 0.416 |
lcfB_16 | pntE | BG845_04165 | BG845_02510 | Long-chain-fatty-acid--CoA ligase. | Pentalenolactone D synthase. | 0.416 |
lipF | lcfB_16 | BG845_01771 | BG845_04165 | Carboxylesterase LipF. | Long-chain-fatty-acid--CoA ligase. | 0.593 |
lipF | nlhH_2 | BG845_01771 | BG845_04104 | Carboxylesterase LipF. | Carboxylesterase NlhH. | 0.704 |
nlhH_2 | OSY38345.1 | BG845_04104 | BG845_04106 | Carboxylesterase NlhH. | Putative HTH-type transcriptional regulator/MT0914. | 0.514 |
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