STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsiB_7Glutathione-binding protein GsiB precursor. (505 aa)    
Predicted Functional Partners:
gsiC_6
Glutathione transport system permease protein GsiC.
 
 0.990
gsiD_7
Glutathione transport system permease protein GsiD.
 
 0.961
nikB_3
Nickel transport system permease protein NikB.
 
 0.876
gsiC_4
Glutathione transport system permease protein GsiC.
 
 0.866
gsiC_9
Glutathione transport system permease protein GsiC.
 
 0.810
nikB_2
Nickel transport system permease protein NikB.
 
 0.802
gsiC_2
Glutathione transport system permease protein GsiC.
 
 0.795
nikB_1
Nickel transport system permease protein NikB.
 
 0.793
gsiC_7
Glutathione transport system permease protein GsiC.
 
 0.786
gsiA_6
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
    0.783
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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