Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY35618.1 | bchM | BG845_05953 | BG845_04188 | Transcriptional regulator BetI. | Magnesium-protoporphyrin O-methyltransferase. | 0.415 |
OSY40135.1 | bchM | BG845_02958 | BG845_04188 | Pyridoxamine 5'-phosphate oxidase. | Magnesium-protoporphyrin O-methyltransferase. | 0.534 |
OSY40387.1 | bchM | BG845_02791 | BG845_04188 | Hypothetical protein. | Magnesium-protoporphyrin O-methyltransferase. | 0.446 |
OSY41248.1 | bchM | BG845_02150 | BG845_04188 | Hypothetical protein. | Magnesium-protoporphyrin O-methyltransferase. | 0.563 |
OSY42310.1 | bchM | BG845_01229 | BG845_04188 | Hypothetical protein. | Magnesium-protoporphyrin O-methyltransferase. | 0.448 |
bchM | OSY35618.1 | BG845_04188 | BG845_05953 | Magnesium-protoporphyrin O-methyltransferase. | Transcriptional regulator BetI. | 0.415 |
bchM | OSY40135.1 | BG845_04188 | BG845_02958 | Magnesium-protoporphyrin O-methyltransferase. | Pyridoxamine 5'-phosphate oxidase. | 0.534 |
bchM | OSY40387.1 | BG845_04188 | BG845_02791 | Magnesium-protoporphyrin O-methyltransferase. | Hypothetical protein. | 0.446 |
bchM | OSY41248.1 | BG845_04188 | BG845_02150 | Magnesium-protoporphyrin O-methyltransferase. | Hypothetical protein. | 0.563 |
bchM | OSY42310.1 | BG845_04188 | BG845_01229 | Magnesium-protoporphyrin O-methyltransferase. | Hypothetical protein. | 0.448 |
bchM | uup | BG845_04188 | BG845_00339 | Magnesium-protoporphyrin O-methyltransferase. | ABC transporter ATP-binding protein uup. | 0.555 |
uup | bchM | BG845_00339 | BG845_04188 | ABC transporter ATP-binding protein uup. | Magnesium-protoporphyrin O-methyltransferase. | 0.555 |