STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY38263.1RNA polymerase sigma factor; Belongs to the sigma-70 factor family. (278 aa)    
Predicted Functional Partners:
OSY38262.1
Hypothetical protein.
     
 0.785
OSY44175.1
Hypothetical protein.
   
 
 0.726
OSY34685.1
6-phosphogluconate phosphatase.
  
    0.597
OSY34383.1
DNA-binding transcriptional repressor PuuR.
  
   
 0.526
kch
Voltage-gated potassium channel Kch.
 
     0.520
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.494
OSY43456.1
Hypothetical protein.
 
   
 0.488
OSY38265.1
Hypothetical protein.
       0.444
rshA
Anti-sigma factor RshA.
  
 
 0.441
OSY35314.1
Hypothetical protein.
  
 
 0.433
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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