STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY38271.1Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. (331 aa)    
Predicted Functional Partners:
lptB
Lipopolysaccharide export system ATP-binding protein LptB.
 
 0.999
livH_1
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
0.993
livF_1
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
  
 0.992
cysA_3
Sulfate/thiosulfate import ATP-binding protein CysA.
  
 0.959
livH_2
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.943
livF_2
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
  
 0.943
braC
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor.
 
  
 0.930
amiC_7
Aliphatic amidase expression-regulating protein.
 
  
 0.770
amiC_1
Aliphatic amidase expression-regulating protein.
 
  
 0.711
gsiA_5
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
  
 0.684
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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