Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY38080.1 | OSY38081.1 | BG845_04253 | BG845_04254 | Hypothetical protein. | Hypothetical protein. | 0.851 |
OSY38080.1 | OSY38261.1 | BG845_04253 | BG845_04214 | Hypothetical protein. | Hypothetical protein. | 0.413 |
OSY38080.1 | OSY40118.1 | BG845_04253 | BG845_02941 | Hypothetical protein. | DoxX. | 0.421 |
OSY38080.1 | OSY41482.1 | BG845_04253 | BG845_01973 | Hypothetical protein. | Hypothetical protein. | 0.484 |
OSY38080.1 | OSY44021.1 | BG845_04253 | BG845_00141 | Hypothetical protein. | Hypothetical protein. | 0.461 |
OSY38080.1 | clpP2_3 | BG845_04253 | BG845_04255 | Hypothetical protein. | ATP-dependent Clp protease proteolytic subunit 2; Belongs to the peptidase S14 family. | 0.578 |
OSY38080.1 | sigG | BG845_04253 | BG845_04256 | Hypothetical protein. | ECF RNA polymerase sigma factor SigG; Belongs to the sigma-70 factor family. ECF subfamily. | 0.491 |
OSY38081.1 | OSY38080.1 | BG845_04254 | BG845_04253 | Hypothetical protein. | Hypothetical protein. | 0.851 |
OSY38081.1 | clpP2_3 | BG845_04254 | BG845_04255 | Hypothetical protein. | ATP-dependent Clp protease proteolytic subunit 2; Belongs to the peptidase S14 family. | 0.748 |
OSY38081.1 | sigG | BG845_04254 | BG845_04256 | Hypothetical protein. | ECF RNA polymerase sigma factor SigG; Belongs to the sigma-70 factor family. ECF subfamily. | 0.540 |
OSY38261.1 | OSY38080.1 | BG845_04214 | BG845_04253 | Hypothetical protein. | Hypothetical protein. | 0.413 |
OSY40118.1 | OSY38080.1 | BG845_02941 | BG845_04253 | DoxX. | Hypothetical protein. | 0.421 |
OSY41482.1 | OSY38080.1 | BG845_01973 | BG845_04253 | Hypothetical protein. | Hypothetical protein. | 0.484 |
OSY44021.1 | OSY38080.1 | BG845_00141 | BG845_04253 | Hypothetical protein. | Hypothetical protein. | 0.461 |
clpP2_3 | OSY38080.1 | BG845_04255 | BG845_04253 | ATP-dependent Clp protease proteolytic subunit 2; Belongs to the peptidase S14 family. | Hypothetical protein. | 0.578 |
clpP2_3 | OSY38081.1 | BG845_04255 | BG845_04254 | ATP-dependent Clp protease proteolytic subunit 2; Belongs to the peptidase S14 family. | Hypothetical protein. | 0.748 |
clpP2_3 | sigG | BG845_04255 | BG845_04256 | ATP-dependent Clp protease proteolytic subunit 2; Belongs to the peptidase S14 family. | ECF RNA polymerase sigma factor SigG; Belongs to the sigma-70 factor family. ECF subfamily. | 0.596 |
sigG | OSY38080.1 | BG845_04256 | BG845_04253 | ECF RNA polymerase sigma factor SigG; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.491 |
sigG | OSY38081.1 | BG845_04256 | BG845_04254 | ECF RNA polymerase sigma factor SigG; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.540 |
sigG | clpP2_3 | BG845_04256 | BG845_04255 | ECF RNA polymerase sigma factor SigG; Belongs to the sigma-70 factor family. ECF subfamily. | ATP-dependent Clp protease proteolytic subunit 2; Belongs to the peptidase S14 family. | 0.596 |