Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY34434.1 | OSY38147.1 | BG845_06859 | BG845_04320 | Hypothetical protein. | Hypothetical protein. | 0.559 |
OSY38147.1 | OSY34434.1 | BG845_04320 | BG845_06859 | Hypothetical protein. | Hypothetical protein. | 0.559 |
OSY38147.1 | OSY38257.1 | BG845_04320 | BG845_04210 | Hypothetical protein. | ABC-2 family transporter protein. | 0.559 |
OSY38147.1 | OSY39089.1 | BG845_04320 | BG845_03658 | Hypothetical protein. | ABC-2 family transporter protein. | 0.559 |
OSY38147.1 | OSY42402.1 | BG845_04320 | BG845_01322 | Hypothetical protein. | ABC-2 family transporter protein. | 0.559 |
OSY38147.1 | irtA_1 | BG845_04320 | BG845_00163 | Hypothetical protein. | Iron import ATP-binding/permease protein IrtA. | 0.409 |
OSY38147.1 | irtB_1 | BG845_04320 | BG845_00164 | Hypothetical protein. | Iron import ATP-binding/permease protein IrtB. | 0.409 |
OSY38147.1 | msbA | BG845_04320 | BG845_05649 | Hypothetical protein. | Lipid A export ATP-binding/permease protein MsbA. | 0.440 |
OSY38147.1 | smc_4 | BG845_04320 | BG845_03383 | Hypothetical protein. | Chromosome partition protein Smc. | 0.415 |
OSY38147.1 | yghB | BG845_04320 | BG845_04318 | Hypothetical protein. | Inner membrane protein YghB. | 0.471 |
OSY38147.1 | yxlF_6 | BG845_04320 | BG845_04319 | Hypothetical protein. | Putative ABC transporter ATP-binding protein YxlF. | 0.827 |
OSY38257.1 | OSY38147.1 | BG845_04210 | BG845_04320 | ABC-2 family transporter protein. | Hypothetical protein. | 0.559 |
OSY39089.1 | OSY38147.1 | BG845_03658 | BG845_04320 | ABC-2 family transporter protein. | Hypothetical protein. | 0.559 |
OSY42402.1 | OSY38147.1 | BG845_01322 | BG845_04320 | ABC-2 family transporter protein. | Hypothetical protein. | 0.559 |
irtA_1 | OSY38147.1 | BG845_00163 | BG845_04320 | Iron import ATP-binding/permease protein IrtA. | Hypothetical protein. | 0.409 |
irtA_1 | irtB_1 | BG845_00163 | BG845_00164 | Iron import ATP-binding/permease protein IrtA. | Iron import ATP-binding/permease protein IrtB. | 0.826 |
irtA_1 | msbA | BG845_00163 | BG845_05649 | Iron import ATP-binding/permease protein IrtA. | Lipid A export ATP-binding/permease protein MsbA. | 0.430 |
irtB_1 | OSY38147.1 | BG845_00164 | BG845_04320 | Iron import ATP-binding/permease protein IrtB. | Hypothetical protein. | 0.409 |
irtB_1 | irtA_1 | BG845_00164 | BG845_00163 | Iron import ATP-binding/permease protein IrtB. | Iron import ATP-binding/permease protein IrtA. | 0.826 |
irtB_1 | msbA | BG845_00164 | BG845_05649 | Iron import ATP-binding/permease protein IrtB. | Lipid A export ATP-binding/permease protein MsbA. | 0.430 |
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