STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG3_33-alpha-(or 20-beta)-hydroxysteroid dehydrogenase. (264 aa)    
Predicted Functional Partners:
fadD
Long-chain-fatty-acid--CoA ligase.
 
 
 0.932
fabG3_2
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase.
  
  
 
0.918
OSY36974.1
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase.
  
  
 
0.916
OSY37589.1
Transcriptional regulator BetI.
 
     0.876
rutA_4
Pyrimidine monooxygenase RutA.
 
     0.801
fabG1_2
3-oxoacyl-[acyl-carrier-protein] reductase FabG1.
 
  
 0.556
mphP
Phenol hydroxylase P5 protein.
 
 0.474
lcfB_16
Long-chain-fatty-acid--CoA ligase.
  
 
 0.465
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.462
kasB
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.440
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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