Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY37589.1 | fabG3_3 | BG845_04626 | BG845_04627 | Transcriptional regulator BetI. | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase. | 0.876 |
OSY37589.1 | fadD | BG845_04626 | BG845_04628 | Transcriptional regulator BetI. | Long-chain-fatty-acid--CoA ligase. | 0.870 |
OSY37589.1 | rutA_4 | BG845_04626 | BG845_04629 | Transcriptional regulator BetI. | Pyrimidine monooxygenase RutA. | 0.610 |
OSY38337.1 | fadD | BG845_04098 | BG845_04628 | Cytochrome P450-pinF2, plant-inducible. | Long-chain-fatty-acid--CoA ligase. | 0.510 |
OSY38337.1 | lcfB_16 | BG845_04098 | BG845_04165 | Cytochrome P450-pinF2, plant-inducible. | Long-chain-fatty-acid--CoA ligase. | 0.706 |
OSY38337.1 | rplF | BG845_04098 | BG845_02333 | Cytochrome P450-pinF2, plant-inducible. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.525 |
OSY42814.1 | bclA_1 | BG845_01055 | BG845_02700 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Benzoate--CoA ligase. | 0.412 |
OSY42814.1 | bclA_2 | BG845_01055 | BG845_03824 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Benzoate--CoA ligase. | 0.919 |
OSY42814.1 | fadD | BG845_01055 | BG845_04628 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Long-chain-fatty-acid--CoA ligase. | 0.613 |
OSY42814.1 | lcfB_16 | BG845_01055 | BG845_04165 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Long-chain-fatty-acid--CoA ligase. | 0.988 |
acsA_4 | fadD | BG845_02903 | BG845_04628 | Acetyl-coenzyme A synthetase. | Long-chain-fatty-acid--CoA ligase. | 0.538 |
acsA_4 | lcfB_16 | BG845_02903 | BG845_04165 | Acetyl-coenzyme A synthetase. | Long-chain-fatty-acid--CoA ligase. | 0.722 |
bclA_1 | OSY42814.1 | BG845_02700 | BG845_01055 | Benzoate--CoA ligase. | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | 0.412 |
bclA_1 | fadD | BG845_02700 | BG845_04628 | Benzoate--CoA ligase. | Long-chain-fatty-acid--CoA ligase. | 0.524 |
bclA_1 | lcfB_16 | BG845_02700 | BG845_04165 | Benzoate--CoA ligase. | Long-chain-fatty-acid--CoA ligase. | 0.675 |
bclA_2 | OSY42814.1 | BG845_03824 | BG845_01055 | Benzoate--CoA ligase. | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | 0.919 |
bclA_2 | fadD | BG845_03824 | BG845_04628 | Benzoate--CoA ligase. | Long-chain-fatty-acid--CoA ligase. | 0.550 |
bclA_2 | lcfB_16 | BG845_03824 | BG845_04165 | Benzoate--CoA ligase. | Long-chain-fatty-acid--CoA ligase. | 0.713 |
fabG3_3 | OSY37589.1 | BG845_04627 | BG845_04626 | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase. | Transcriptional regulator BetI. | 0.876 |
fabG3_3 | fadD | BG845_04627 | BG845_04628 | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase. | Long-chain-fatty-acid--CoA ligase. | 0.932 |
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