Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY36132.1 | smvA | BG845_05647 | BG845_04653 | Hypothetical protein. | Methyl viologen resistance protein SmvA. | 0.486 |
OSY36977.1 | smvA | BG845_05060 | BG845_04653 | HNH endonuclease. | Methyl viologen resistance protein SmvA. | 0.482 |
OSY37618.1 | OSY37619.1 | BG845_04655 | BG845_04656 | Hypothetical protein. | Hypothetical protein. | 0.628 |
OSY37618.1 | OSY37620.1 | BG845_04655 | BG845_04657 | Hypothetical protein. | Hypothetical protein. | 0.628 |
OSY37618.1 | qacA_3 | BG845_04655 | BG845_04654 | Hypothetical protein. | Antiseptic resistance protein. | 0.545 |
OSY37618.1 | smvA | BG845_04655 | BG845_04653 | Hypothetical protein. | Methyl viologen resistance protein SmvA. | 0.479 |
OSY37619.1 | OSY37618.1 | BG845_04656 | BG845_04655 | Hypothetical protein. | Hypothetical protein. | 0.628 |
OSY37619.1 | OSY37620.1 | BG845_04656 | BG845_04657 | Hypothetical protein. | Hypothetical protein. | 0.792 |
OSY37619.1 | qacA_3 | BG845_04656 | BG845_04654 | Hypothetical protein. | Antiseptic resistance protein. | 0.452 |
OSY37619.1 | smvA | BG845_04656 | BG845_04653 | Hypothetical protein. | Methyl viologen resistance protein SmvA. | 0.402 |
OSY37620.1 | OSY37618.1 | BG845_04657 | BG845_04655 | Hypothetical protein. | Hypothetical protein. | 0.628 |
OSY37620.1 | OSY37619.1 | BG845_04657 | BG845_04656 | Hypothetical protein. | Hypothetical protein. | 0.792 |
OSY37620.1 | qacA_3 | BG845_04657 | BG845_04654 | Hypothetical protein. | Antiseptic resistance protein. | 0.452 |
OSY37620.1 | smvA | BG845_04657 | BG845_04653 | Hypothetical protein. | Methyl viologen resistance protein SmvA. | 0.401 |
cypM | puuR_2 | BG845_04652 | BG845_04651 | Cypemycin methyltransferase. | HTH-type transcriptional regulator PuuR. | 0.832 |
cypM | qacA_3 | BG845_04652 | BG845_04654 | Cypemycin methyltransferase. | Antiseptic resistance protein. | 0.493 |
cypM | smvA | BG845_04652 | BG845_04653 | Cypemycin methyltransferase. | Methyl viologen resistance protein SmvA. | 0.561 |
kynB | qacA_3 | BG845_06718 | BG845_04654 | Kynurenine formamidase. | Antiseptic resistance protein. | 0.407 |
kynB | smvA | BG845_06718 | BG845_04653 | Kynurenine formamidase. | Methyl viologen resistance protein SmvA. | 0.407 |
puuR_2 | cypM | BG845_04651 | BG845_04652 | HTH-type transcriptional regulator PuuR. | Cypemycin methyltransferase. | 0.832 |
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