Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY36974.1 | butA | BG845_05057 | BG845_04743 | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase. | Diacetyl reductase [(S)-acetoin forming]. | 0.805 |
butA | OSY36974.1 | BG845_04743 | BG845_05057 | Diacetyl reductase [(S)-acetoin forming]. | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase. | 0.805 |
butA | cpnA_1 | BG845_04743 | BG845_01504 | Diacetyl reductase [(S)-acetoin forming]. | Cyclopentanol dehydrogenase. | 0.807 |
butA | cpnA_3 | BG845_04743 | BG845_04946 | Diacetyl reductase [(S)-acetoin forming]. | Cyclopentanol dehydrogenase. | 0.807 |
butA | fabG_17 | BG845_04743 | BG845_03314 | Diacetyl reductase [(S)-acetoin forming]. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.805 |
butA | fabG_21 | BG845_04743 | BG845_04160 | Diacetyl reductase [(S)-acetoin forming]. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.805 |
butA | fabG_7 | BG845_04743 | BG845_01073 | Diacetyl reductase [(S)-acetoin forming]. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.803 |
butA | kduD_4 | BG845_04743 | BG845_02574 | Diacetyl reductase [(S)-acetoin forming]. | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase. | 0.807 |
butA | phbB_2 | BG845_04743 | BG845_05035 | Diacetyl reductase [(S)-acetoin forming]. | Acetoacetyl-CoA reductase. | 0.807 |
butA | pldh-t | BG845_04743 | BG845_02548 | Diacetyl reductase [(S)-acetoin forming]. | Pyridoxal 4-dehydrogenase. | 0.802 |
butA | xecD_1 | BG845_04743 | BG845_02523 | Diacetyl reductase [(S)-acetoin forming]. | 2-(R)-hydroxypropyl-CoM dehydrogenase. | 0.803 |
cpnA_1 | butA | BG845_01504 | BG845_04743 | Cyclopentanol dehydrogenase. | Diacetyl reductase [(S)-acetoin forming]. | 0.807 |
cpnA_3 | butA | BG845_04946 | BG845_04743 | Cyclopentanol dehydrogenase. | Diacetyl reductase [(S)-acetoin forming]. | 0.807 |
fabG_17 | butA | BG845_03314 | BG845_04743 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | Diacetyl reductase [(S)-acetoin forming]. | 0.805 |
fabG_21 | butA | BG845_04160 | BG845_04743 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | Diacetyl reductase [(S)-acetoin forming]. | 0.805 |
fabG_21 | pldh-t | BG845_04160 | BG845_02548 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | Pyridoxal 4-dehydrogenase. | 0.771 |
fabG_7 | butA | BG845_01073 | BG845_04743 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | Diacetyl reductase [(S)-acetoin forming]. | 0.803 |
kduD_4 | butA | BG845_02574 | BG845_04743 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase. | Diacetyl reductase [(S)-acetoin forming]. | 0.807 |
phbB_2 | butA | BG845_05035 | BG845_04743 | Acetoacetyl-CoA reductase. | Diacetyl reductase [(S)-acetoin forming]. | 0.807 |
pldh-t | butA | BG845_02548 | BG845_04743 | Pyridoxal 4-dehydrogenase. | Diacetyl reductase [(S)-acetoin forming]. | 0.802 |
page 1 of 2