STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
butADiacetyl reductase [(S)-acetoin forming]. (280 aa)    
Predicted Functional Partners:
cpnA_1
Cyclopentanol dehydrogenase.
 
 
 0.807
kduD_4
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase.
 
 
 0.807
cpnA_3
Cyclopentanol dehydrogenase.
 
 
 0.807
phbB_2
Acetoacetyl-CoA reductase.
 
 
 0.807
fabG_17
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
 
 0.805
fabG_21
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
 
 0.805
OSY36974.1
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase.
 
 
 0.805
fabG_7
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
 
 0.803
xecD_1
2-(R)-hydroxypropyl-CoM dehydrogenase.
 
 
 0.803
pldh-t
Pyridoxal 4-dehydrogenase.
 
 
 0.802
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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