Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY37314.1 | OSY37336.1 | BG845_04825 | BG845_04847 | Hypothetical protein. | YGGT family protein. | 0.626 |
OSY37314.1 | OSY37452.1 | BG845_04825 | BG845_04755 | Hypothetical protein. | RDD family protein. | 0.556 |
OSY37314.1 | OSY42036.1 | BG845_04825 | BG845_01532 | Hypothetical protein. | Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG). | 0.571 |
OSY37314.1 | ccsB_1 | BG845_04825 | BG845_00313 | Hypothetical protein. | Cytochrome c biogenesis protein CcsB. | 0.502 |
OSY37314.1 | ccsB_2 | BG845_04825 | BG845_06875 | Hypothetical protein. | Cytochrome c biogenesis protein CcsB. | 0.483 |
OSY37314.1 | ctaA | BG845_04825 | BG845_03655 | Hypothetical protein. | Heme A synthase. | 0.535 |
OSY37314.1 | ctaF | BG845_04825 | BG845_04728 | Hypothetical protein. | Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | 0.735 |
OSY37314.1 | qcrC | BG845_04825 | BG845_04788 | Hypothetical protein. | Menaquinol-cytochrome c reductase cytochrome c subunit. | 0.750 |
OSY37336.1 | OSY37314.1 | BG845_04847 | BG845_04825 | YGGT family protein. | Hypothetical protein. | 0.626 |
OSY37336.1 | OSY37452.1 | BG845_04847 | BG845_04755 | YGGT family protein. | RDD family protein. | 0.572 |
OSY37336.1 | OSY39100.1 | BG845_04847 | BG845_03669 | YGGT family protein. | Glucose-6-phosphate dehydrogenase subunit. | 0.698 |
OSY37336.1 | ccsB_1 | BG845_04847 | BG845_00313 | YGGT family protein. | Cytochrome c biogenesis protein CcsB. | 0.490 |
OSY37336.1 | ccsB_2 | BG845_04847 | BG845_06875 | YGGT family protein. | Cytochrome c biogenesis protein CcsB. | 0.482 |
OSY37336.1 | qcrC | BG845_04847 | BG845_04788 | YGGT family protein. | Menaquinol-cytochrome c reductase cytochrome c subunit. | 0.456 |
OSY37452.1 | OSY37314.1 | BG845_04755 | BG845_04825 | RDD family protein. | Hypothetical protein. | 0.556 |
OSY37452.1 | OSY37336.1 | BG845_04755 | BG845_04847 | RDD family protein. | YGGT family protein. | 0.572 |
OSY37452.1 | OSY39100.1 | BG845_04755 | BG845_03669 | RDD family protein. | Glucose-6-phosphate dehydrogenase subunit. | 0.605 |
OSY37452.1 | OSY42036.1 | BG845_04755 | BG845_01532 | RDD family protein. | Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG). | 0.671 |
OSY37452.1 | ccsB_1 | BG845_04755 | BG845_00313 | RDD family protein. | Cytochrome c biogenesis protein CcsB. | 0.649 |
OSY37452.1 | ccsB_2 | BG845_04755 | BG845_06875 | RDD family protein. | Cytochrome c biogenesis protein CcsB. | 0.639 |
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