STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY37452.1RDD family protein. (157 aa)    
Predicted Functional Partners:
glnA_2
Glutamine synthetase.
  
 
 0.714
qcrC
Menaquinol-cytochrome c reductase cytochrome c subunit.
  
     0.694
OSY42036.1
Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG).
  
     0.671
ccsB_1
Cytochrome c biogenesis protein CcsB.
  
     0.649
ccsB_2
Cytochrome c biogenesis protein CcsB.
  
     0.639
OSY39100.1
Glucose-6-phosphate dehydrogenase subunit.
  
     0.605
ctaF
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.595
ctaA
Heme A synthase.
 
   
 0.577
OSY37336.1
YGGT family protein.
  
     0.572
OSY37314.1
Hypothetical protein.
  
     0.556
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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