STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fprA_3NADPH-ferredoxin reductase FprA. (462 aa)    
Predicted Functional Partners:
gltB_2
Glutamate synthase [NADPH] large chain.
  
 
 0.999
gltA_4
Glutamate synthase [NADPH] large chain.
  
 
 0.999
mphP
Phenol hydroxylase P5 protein.
  
 0.902
OSY39625.1
Hypothetical protein.
  
  
 0.739
sir
Sulfite reductase [ferredoxin]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.734
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
  
  
 0.733
OSY37729.1
GXGXG motif protein.
  
 
 0.715
gltA_3
Glutamate synthase [NADPH] large chain; Belongs to the glutamate synthase family.
  
 
 0.713
mdeA_1
Methionine gamma-lyase.
  
  
 0.644
mdeA_2
Methionine gamma-lyase.
  
  
 0.644
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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