STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY37295.1Anaerobic benzoate catabolism transcriptional regulator. (397 aa)    
Predicted Functional Partners:
OSY35280.1
Hypothetical protein.
  
   
 0.581
OSY37296.1
Hypothetical protein.
       0.559
OSY37297.1
Hypothetical protein.
       0.559
OSY42301.1
Tetratricopeptide repeat protein.
  
     0.556
OSY35985.1
Hypothetical protein.
  
     0.545
OSY39585.1
Hypothetical protein.
  
   
 0.540
OSY35001.1
55.5 kDa and 49.5 kDa sporulation proteins.
  
     0.530
eccCa1_3
ESX-1 secretion system protein EccCa1.
 
   
 0.518
smc_7
Chromosome partition protein Smc.
  
     0.472
tmk_2
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
    0.466
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.