STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
bsdCPhenolic acid decarboxylase subunit C; Belongs to the UbiD family. (482 aa)    
Predicted Functional Partners:
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase partner protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
  
 0.993
OSY37167.1
Long-chain-fatty-acid--CoA ligase FadD13.
  
  
  0.912
betA_4
Oxygen-dependent choline dehydrogenase.
    
  0.903
gltC_8
HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family.
 
   
 0.817
putP_2
Sodium/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.817
ilvB
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
   
 
 0.805
mdlB_2
(S)-mandelate dehydrogenase.
       0.773
OSY37160.1
Transcriptional regulator PadR-like family protein.
 
     0.629
mphP
Phenol hydroxylase P5 protein.
  
  
 0.518
hmp
Flavohemoprotein; Belongs to the globin family.
  
    0.478
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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