Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY37160.1 | bsdC | BG845_04854 | BG845_04857 | Transcriptional regulator PadR-like family protein. | Phenolic acid decarboxylase subunit C; Belongs to the UbiD family. | 0.629 |
OSY37160.1 | gltC_8 | BG845_04854 | BG845_04856 | Transcriptional regulator PadR-like family protein. | HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family. | 0.545 |
OSY37160.1 | ilvB | BG845_04854 | BG845_04859 | Transcriptional regulator PadR-like family protein. | Acetolactate synthase large subunit; Belongs to the TPP enzyme family. | 0.530 |
OSY37160.1 | mdlB_2 | BG845_04854 | BG845_04858 | Transcriptional regulator PadR-like family protein. | (S)-mandelate dehydrogenase. | 0.527 |
OSY37160.1 | putP_2 | BG845_04854 | BG845_04860 | Transcriptional regulator PadR-like family protein. | Sodium/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.527 |
OSY37160.1 | ubiX | BG845_04854 | BG845_04855 | Transcriptional regulator PadR-like family protein. | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase partner protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.607 |
OSY37167.1 | betA_4 | BG845_04861 | BG845_05413 | Long-chain-fatty-acid--CoA ligase FadD13. | Oxygen-dependent choline dehydrogenase. | 0.903 |
OSY37167.1 | bsdC | BG845_04861 | BG845_04857 | Long-chain-fatty-acid--CoA ligase FadD13. | Phenolic acid decarboxylase subunit C; Belongs to the UbiD family. | 0.912 |
betA_4 | OSY37167.1 | BG845_05413 | BG845_04861 | Oxygen-dependent choline dehydrogenase. | Long-chain-fatty-acid--CoA ligase FadD13. | 0.903 |
betA_4 | bsdC | BG845_05413 | BG845_04857 | Oxygen-dependent choline dehydrogenase. | Phenolic acid decarboxylase subunit C; Belongs to the UbiD family. | 0.903 |
bsdC | OSY37160.1 | BG845_04857 | BG845_04854 | Phenolic acid decarboxylase subunit C; Belongs to the UbiD family. | Transcriptional regulator PadR-like family protein. | 0.629 |
bsdC | OSY37167.1 | BG845_04857 | BG845_04861 | Phenolic acid decarboxylase subunit C; Belongs to the UbiD family. | Long-chain-fatty-acid--CoA ligase FadD13. | 0.912 |
bsdC | betA_4 | BG845_04857 | BG845_05413 | Phenolic acid decarboxylase subunit C; Belongs to the UbiD family. | Oxygen-dependent choline dehydrogenase. | 0.903 |
bsdC | gltC_8 | BG845_04857 | BG845_04856 | Phenolic acid decarboxylase subunit C; Belongs to the UbiD family. | HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family. | 0.817 |
bsdC | hmp | BG845_04857 | BG845_04391 | Phenolic acid decarboxylase subunit C; Belongs to the UbiD family. | Flavohemoprotein; Belongs to the globin family. | 0.478 |
bsdC | ilvB | BG845_04857 | BG845_04859 | Phenolic acid decarboxylase subunit C; Belongs to the UbiD family. | Acetolactate synthase large subunit; Belongs to the TPP enzyme family. | 0.805 |
bsdC | mdlB_2 | BG845_04857 | BG845_04858 | Phenolic acid decarboxylase subunit C; Belongs to the UbiD family. | (S)-mandelate dehydrogenase. | 0.773 |
bsdC | mphP | BG845_04857 | BG845_04097 | Phenolic acid decarboxylase subunit C; Belongs to the UbiD family. | Phenol hydroxylase P5 protein. | 0.518 |
bsdC | putP_2 | BG845_04857 | BG845_04860 | Phenolic acid decarboxylase subunit C; Belongs to the UbiD family. | Sodium/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.817 |
bsdC | ubiX | BG845_04857 | BG845_04855 | Phenolic acid decarboxylase subunit C; Belongs to the UbiD family. | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase partner protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.993 |
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