STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY37194.1Transcriptional regulator PadR-like family protein. (212 aa)    
Predicted Functional Partners:
ino1
Inositol-3-phosphate synthase.
 
   
 0.939
OSY37193.1
Hypothetical protein.
       0.655
OSY43990.1
Roadblock/LC7 domain protein.
 
     0.558
OSY41767.1
Hypothetical protein.
  
     0.502
HtrB
Phosphatidylinositol mannoside acyltransferase.
 
     0.474
OSY41502.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.474
OSY40546.1
Hypothetical protein.
  
     0.469
OSY37565.1
Possibl zinc metallo-peptidase.
  
     0.461
mshA_1
D-inositol 3-phosphate glycosyltransferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.
  
     0.458
OSY43128.1
Hypothetical protein.
  
     0.458
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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