STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cat1_2Succinyl-CoA:coenzyme A transferase. (403 aa)    
Predicted Functional Partners:
budC_3
Diacetyl reductase [(S)-acetoin forming].
  
 
 0.818
fabG_25
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
 
 0.818
fadB
Putative enoyl-CoA hydratase.
 
 
 0.817
scpA_2
Methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
  
 0.800
fadA_5
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.799
OSY37095.1
Acyl-CoA dehydrogenase fadE12.
  
  
 0.799
yngG_3
Hydroxymethylglutaryl-CoA lyase YngG.
     
 0.792
menB_5
1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
       0.782
echA8_9
Putative enoyl-CoA hydratase echA8; Overlaps another CDS with the same product name; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.755
echA8_10
Putative enoyl-CoA hydratase echA8; Overlaps another CDS with the same product name; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.755
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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