Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY36373.1 | OSY36926.1 | BG845_05450 | BG845_05009 | Hypothetical protein. | Helix-turn-helix protein. | 0.486 |
OSY36925.1 | OSY36926.1 | BG845_05008 | BG845_05009 | Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Helix-turn-helix protein. | 0.723 |
OSY36925.1 | penP | BG845_05008 | BG845_05007 | Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Beta-lactamase precursor. | 0.667 |
OSY36926.1 | OSY36373.1 | BG845_05009 | BG845_05450 | Helix-turn-helix protein. | Hypothetical protein. | 0.486 |
OSY36926.1 | OSY36925.1 | BG845_05009 | BG845_05008 | Helix-turn-helix protein. | Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.723 |
OSY36926.1 | penP | BG845_05009 | BG845_05007 | Helix-turn-helix protein. | Beta-lactamase precursor. | 0.446 |
OSY36926.1 | yjgH | BG845_05009 | BG845_03675 | Helix-turn-helix protein. | RutC family protein YjgH. | 0.404 |
penP | OSY36925.1 | BG845_05007 | BG845_05008 | Beta-lactamase precursor. | Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.667 |
penP | OSY36926.1 | BG845_05007 | BG845_05009 | Beta-lactamase precursor. | Helix-turn-helix protein. | 0.446 |
yjgH | OSY36926.1 | BG845_03675 | BG845_05009 | RutC family protein YjgH. | Helix-turn-helix protein. | 0.404 |