STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnMPutative glutamine ABC transporter permease protein GlnM. (215 aa)    
Predicted Functional Partners:
glnH
ABC transporter glutamine-binding protein GlnH precursor.
 0.999
glnQ
Glutamine transport ATP-binding protein GlnQ.
 
 0.995
artQ
Arginine transport system permease protein ArtQ.
 
 
0.980
tcyC
L-cystine import ATP-binding protein TcyC.
 
 
 0.966
tcyA
L-cystine-binding protein TcyA precursor.
 
 0.924
tcyB
L-cystine transport system permease protein TcyB.
 
0.721
argT
Lysine-arginine-ornithine-binding periplasmic protein precursor.
 
 
 0.622
oppA_1
Oligopeptide-binding protein OppA precursor.
  
 
 0.529
potA_4
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.502
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta.
   
   0.439
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.