Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AhpC | OSY36866.1 | BG845_05139 | BG845_05138 | Putative peroxiredoxin/MT2298. | Hypothetical protein. | 0.758 |
OSY35418.1 | OSY36866.1 | BG845_06054 | BG845_05138 | Hypothetical protein. | Hypothetical protein. | 0.684 |
OSY35418.1 | OSY38286.1 | BG845_06054 | BG845_04240 | Hypothetical protein. | Hypothetical protein. | 0.560 |
OSY35418.1 | OSY38658.1 | BG845_06054 | BG845_03858 | Hypothetical protein. | Hypothetical protein. | 0.484 |
OSY35418.1 | mshD_4 | BG845_06054 | BG845_02152 | Hypothetical protein. | Mycothiol acetyltransferase. | 0.557 |
OSY35418.1 | rbpA_1 | BG845_06054 | BG845_02062 | Hypothetical protein. | RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.476 |
OSY36866.1 | AhpC | BG845_05138 | BG845_05139 | Hypothetical protein. | Putative peroxiredoxin/MT2298. | 0.758 |
OSY36866.1 | OSY35418.1 | BG845_05138 | BG845_06054 | Hypothetical protein. | Hypothetical protein. | 0.684 |
OSY36866.1 | OSY38286.1 | BG845_05138 | BG845_04240 | Hypothetical protein. | Hypothetical protein. | 0.760 |
OSY36866.1 | OSY38658.1 | BG845_05138 | BG845_03858 | Hypothetical protein. | Hypothetical protein. | 0.699 |
OSY36866.1 | OSY43587.1 | BG845_05138 | BG845_00530 | Hypothetical protein. | Cobalamin-independent synthase, Catalytic domain. | 0.713 |
OSY36866.1 | OSY44129.1 | BG845_05138 | BG845_00250 | Hypothetical protein. | Hypothetical protein. | 0.711 |
OSY36866.1 | aspS | BG845_05138 | BG845_01752 | Hypothetical protein. | Aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.735 |
OSY36866.1 | crp_3 | BG845_05138 | BG845_04363 | Hypothetical protein. | cAMP receptor protein. | 0.728 |
OSY36866.1 | mshD_4 | BG845_05138 | BG845_02152 | Hypothetical protein. | Mycothiol acetyltransferase. | 0.742 |
OSY36866.1 | rbpA_1 | BG845_05138 | BG845_02062 | Hypothetical protein. | RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.727 |
OSY38286.1 | OSY35418.1 | BG845_04240 | BG845_06054 | Hypothetical protein. | Hypothetical protein. | 0.560 |
OSY38286.1 | OSY36866.1 | BG845_04240 | BG845_05138 | Hypothetical protein. | Hypothetical protein. | 0.760 |
OSY38286.1 | OSY38658.1 | BG845_04240 | BG845_03858 | Hypothetical protein. | Hypothetical protein. | 0.463 |
OSY38286.1 | OSY44129.1 | BG845_04240 | BG845_00250 | Hypothetical protein. | Hypothetical protein. | 0.677 |
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