Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AhpC | OSY36866.1 | BG845_05139 | BG845_05138 | Putative peroxiredoxin/MT2298. | Hypothetical protein. | 0.758 |
AhpC | RpsA | BG845_05139 | BG845_04219 | Putative peroxiredoxin/MT2298. | Hypothetical protein. | 0.439 |
AhpC | bcp_1 | BG845_05139 | BG845_02156 | Putative peroxiredoxin/MT2298. | Putative peroxiredoxin bcp. | 0.603 |
AhpC | hsdR | BG845_05139 | BG845_05141 | Putative peroxiredoxin/MT2298. | Type-1 restriction enzyme R protein. | 0.428 |
AhpC | katG | BG845_05139 | BG845_02659 | Putative peroxiredoxin/MT2298. | Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.403 |
AhpC | lgt | BG845_05139 | BG845_02758 | Putative peroxiredoxin/MT2298. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.432 |
AhpC | trpC | BG845_05139 | BG845_02757 | Putative peroxiredoxin/MT2298. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.594 |
AhpC | tsaB | BG845_05139 | BG845_02390 | Putative peroxiredoxin/MT2298. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.435 |
OSY36866.1 | AhpC | BG845_05138 | BG845_05139 | Hypothetical protein. | Putative peroxiredoxin/MT2298. | 0.758 |
OSY36866.1 | RpsA | BG845_05138 | BG845_04219 | Hypothetical protein. | Hypothetical protein. | 0.642 |
RpsA | AhpC | BG845_04219 | BG845_05139 | Hypothetical protein. | Putative peroxiredoxin/MT2298. | 0.439 |
RpsA | OSY36866.1 | BG845_04219 | BG845_05138 | Hypothetical protein. | Hypothetical protein. | 0.642 |
RpsA | katG | BG845_04219 | BG845_02659 | Hypothetical protein. | Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.422 |
RpsA | trpC | BG845_04219 | BG845_02757 | Hypothetical protein. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.455 |
bcp_1 | AhpC | BG845_02156 | BG845_05139 | Putative peroxiredoxin bcp. | Putative peroxiredoxin/MT2298. | 0.603 |
hsdR | AhpC | BG845_05141 | BG845_05139 | Type-1 restriction enzyme R protein. | Putative peroxiredoxin/MT2298. | 0.428 |
katG | AhpC | BG845_02659 | BG845_05139 | Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | Putative peroxiredoxin/MT2298. | 0.403 |
katG | RpsA | BG845_02659 | BG845_04219 | Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | Hypothetical protein. | 0.422 |
lgt | AhpC | BG845_02758 | BG845_05139 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Putative peroxiredoxin/MT2298. | 0.432 |
lgt | trpC | BG845_02758 | BG845_02757 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.926 |
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