Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CcdA | cycY | BG845_00312 | BG845_05264 | Cytochrome C biogenesis protein transmembrane region. | Thiol:disulfide interchange protein CycY precursor. | 0.436 |
CcdA | dsbE_2 | BG845_00312 | BG845_05263 | Cytochrome C biogenesis protein transmembrane region. | Thiol:disulfide interchange protein DsbE. | 0.699 |
OSY34418.1 | cycY | BG845_06874 | BG845_05264 | Cytochrome C biogenesis protein transmembrane region. | Thiol:disulfide interchange protein CycY precursor. | 0.436 |
OSY34418.1 | dsbE_2 | BG845_06874 | BG845_05263 | Cytochrome C biogenesis protein transmembrane region. | Thiol:disulfide interchange protein DsbE. | 0.711 |
OSY36660.1 | cycY | BG845_05265 | BG845_05264 | Hypothetical protein. | Thiol:disulfide interchange protein CycY precursor. | 0.773 |
OSY36660.1 | dsbE_2 | BG845_05265 | BG845_05263 | Hypothetical protein. | Thiol:disulfide interchange protein DsbE. | 0.773 |
OSY36824.1 | cycY | BG845_05096 | BG845_05264 | Hypothetical protein. | Thiol:disulfide interchange protein CycY precursor. | 0.790 |
OSY36824.1 | dsbE_2 | BG845_05096 | BG845_05263 | Hypothetical protein. | Thiol:disulfide interchange protein DsbE. | 0.737 |
OSY37960.1 | cycY | BG845_04367 | BG845_05264 | Putative NUDIX hydrolase. | Thiol:disulfide interchange protein CycY precursor. | 0.759 |
OSY37960.1 | dsbE_2 | BG845_04367 | BG845_05263 | Putative NUDIX hydrolase. | Thiol:disulfide interchange protein DsbE. | 0.834 |
OSY42852.1 | cycY | BG845_01094 | BG845_05264 | Putative peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | Thiol:disulfide interchange protein CycY precursor. | 0.727 |
OSY42852.1 | dsbE_2 | BG845_01094 | BG845_05263 | Putative peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | Thiol:disulfide interchange protein DsbE. | 0.727 |
cycY | CcdA | BG845_05264 | BG845_00312 | Thiol:disulfide interchange protein CycY precursor. | Cytochrome C biogenesis protein transmembrane region. | 0.436 |
cycY | OSY34418.1 | BG845_05264 | BG845_06874 | Thiol:disulfide interchange protein CycY precursor. | Cytochrome C biogenesis protein transmembrane region. | 0.436 |
cycY | OSY36660.1 | BG845_05264 | BG845_05265 | Thiol:disulfide interchange protein CycY precursor. | Hypothetical protein. | 0.773 |
cycY | OSY36824.1 | BG845_05264 | BG845_05096 | Thiol:disulfide interchange protein CycY precursor. | Hypothetical protein. | 0.790 |
cycY | OSY37960.1 | BG845_05264 | BG845_04367 | Thiol:disulfide interchange protein CycY precursor. | Putative NUDIX hydrolase. | 0.759 |
cycY | OSY42852.1 | BG845_05264 | BG845_01094 | Thiol:disulfide interchange protein CycY precursor. | Putative peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.727 |
cycY | dsbE_2 | BG845_05264 | BG845_05263 | Thiol:disulfide interchange protein CycY precursor. | Thiol:disulfide interchange protein DsbE. | 0.906 |
cycY | msrA3 | BG845_05264 | BG845_00903 | Thiol:disulfide interchange protein CycY precursor. | Peptide methionine sulfoxide reductase MsrA 3; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.870 |
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