Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY36671.1 | mdtH_3 | BG845_05276 | BG845_05275 | Hypothetical protein. | Multidrug resistance protein MdtH. | 0.591 |
OSY36671.1 | sbnA_1 | BG845_05276 | BG845_05274 | Hypothetical protein. | Putative siderophore biosynthesis protein SbnA. | 0.587 |
OSY36977.1 | mdtH_3 | BG845_05060 | BG845_05275 | HNH endonuclease. | Multidrug resistance protein MdtH. | 0.451 |
OSY40548.1 | mdtH_3 | BG845_02623 | BG845_05275 | Bacterial regulatory proteins, tetR family. | Multidrug resistance protein MdtH. | 0.403 |
OSY40548.1 | sbnA_1 | BG845_02623 | BG845_05274 | Bacterial regulatory proteins, tetR family. | Putative siderophore biosynthesis protein SbnA. | 0.402 |
OSY40548.1 | sbnA_3 | BG845_02623 | BG845_06674 | Bacterial regulatory proteins, tetR family. | Putative siderophore biosynthesis protein SbnA. | 0.414 |
mdtH_3 | OSY36671.1 | BG845_05275 | BG845_05276 | Multidrug resistance protein MdtH. | Hypothetical protein. | 0.591 |
mdtH_3 | OSY36977.1 | BG845_05275 | BG845_05060 | Multidrug resistance protein MdtH. | HNH endonuclease. | 0.451 |
mdtH_3 | OSY40548.1 | BG845_05275 | BG845_02623 | Multidrug resistance protein MdtH. | Bacterial regulatory proteins, tetR family. | 0.403 |
mdtH_3 | sbnA_1 | BG845_05275 | BG845_05274 | Multidrug resistance protein MdtH. | Putative siderophore biosynthesis protein SbnA. | 0.953 |
mdtH_3 | sbnA_3 | BG845_05275 | BG845_06674 | Multidrug resistance protein MdtH. | Putative siderophore biosynthesis protein SbnA. | 0.802 |
mdtH_3 | ykoD_1 | BG845_05275 | BG845_01008 | Multidrug resistance protein MdtH. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.421 |
sbnA_1 | OSY36671.1 | BG845_05274 | BG845_05276 | Putative siderophore biosynthesis protein SbnA. | Hypothetical protein. | 0.587 |
sbnA_1 | OSY40548.1 | BG845_05274 | BG845_02623 | Putative siderophore biosynthesis protein SbnA. | Bacterial regulatory proteins, tetR family. | 0.402 |
sbnA_1 | mdtH_3 | BG845_05274 | BG845_05275 | Putative siderophore biosynthesis protein SbnA. | Multidrug resistance protein MdtH. | 0.953 |
sbnA_1 | sbnA_3 | BG845_05274 | BG845_06674 | Putative siderophore biosynthesis protein SbnA. | Putative siderophore biosynthesis protein SbnA. | 0.900 |
sbnA_3 | OSY40548.1 | BG845_06674 | BG845_02623 | Putative siderophore biosynthesis protein SbnA. | Bacterial regulatory proteins, tetR family. | 0.414 |
sbnA_3 | mdtH_3 | BG845_06674 | BG845_05275 | Putative siderophore biosynthesis protein SbnA. | Multidrug resistance protein MdtH. | 0.802 |
sbnA_3 | sbnA_1 | BG845_06674 | BG845_05274 | Putative siderophore biosynthesis protein SbnA. | Putative siderophore biosynthesis protein SbnA. | 0.900 |
ykoD_1 | mdtH_3 | BG845_01008 | BG845_05275 | Putative HMP/thiamine import ATP-binding protein YkoD. | Multidrug resistance protein MdtH. | 0.421 |