Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY35045.1 | OSY36536.1 | BG845_06358 | BG845_05302 | Glycosyl hydrolases family 16. | GtrA-like protein. | 0.557 |
OSY36535.1 | OSY36536.1 | BG845_05301 | BG845_05302 | Fluoroacetate dehalogenase. | GtrA-like protein. | 0.802 |
OSY36536.1 | OSY35045.1 | BG845_05302 | BG845_06358 | GtrA-like protein. | Glycosyl hydrolases family 16. | 0.557 |
OSY36536.1 | OSY36535.1 | BG845_05302 | BG845_05301 | GtrA-like protein. | Fluoroacetate dehalogenase. | 0.802 |
OSY36536.1 | OSY38102.1 | BG845_05302 | BG845_04275 | GtrA-like protein. | Glycosyl hydrolases family 16. | 0.527 |
OSY36536.1 | OSY39231.1 | BG845_05302 | BG845_03501 | GtrA-like protein. | Glycosyl hydrolases family 16. | 0.592 |
OSY36536.1 | OSY41330.1 | BG845_05302 | BG845_02232 | GtrA-like protein. | Hypothetical protein. | 0.550 |
OSY36536.1 | OSY41765.1 | BG845_05302 | BG845_01793 | GtrA-like protein. | Glycosyl hydrolases family 16. | 0.532 |
OSY36536.1 | OSY42141.1 | BG845_05302 | BG845_01639 | GtrA-like protein. | Glycosyl hydrolases family 16. | 0.566 |
OSY36536.1 | OSY42209.1 | BG845_05302 | BG845_01708 | GtrA-like protein. | Hypothetical protein. | 0.546 |
OSY36536.1 | OSY42939.1 | BG845_05302 | BG845_01181 | GtrA-like protein. | Glycosyl hydrolases family 16. | 0.551 |
OSY36536.1 | rmlD | BG845_05302 | BG845_00614 | GtrA-like protein. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.683 |
OSY38102.1 | OSY36536.1 | BG845_04275 | BG845_05302 | Glycosyl hydrolases family 16. | GtrA-like protein. | 0.527 |
OSY39231.1 | OSY36536.1 | BG845_03501 | BG845_05302 | Glycosyl hydrolases family 16. | GtrA-like protein. | 0.592 |
OSY41330.1 | OSY36536.1 | BG845_02232 | BG845_05302 | Hypothetical protein. | GtrA-like protein. | 0.550 |
OSY41330.1 | rmlD | BG845_02232 | BG845_00614 | Hypothetical protein. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.446 |
OSY41765.1 | OSY36536.1 | BG845_01793 | BG845_05302 | Glycosyl hydrolases family 16. | GtrA-like protein. | 0.532 |
OSY42141.1 | OSY36536.1 | BG845_01639 | BG845_05302 | Glycosyl hydrolases family 16. | GtrA-like protein. | 0.566 |
OSY42209.1 | OSY36536.1 | BG845_01708 | BG845_05302 | Hypothetical protein. | GtrA-like protein. | 0.546 |
OSY42939.1 | OSY36536.1 | BG845_01181 | BG845_05302 | Glycosyl hydrolases family 16. | GtrA-like protein. | 0.551 |
page 1 of 2