STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY36536.1GtrA-like protein. (183 aa)    
Predicted Functional Partners:
OSY36535.1
Fluoroacetate dehalogenase.
  
   0.802
rmlD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.683
OSY39231.1
Glycosyl hydrolases family 16.
 
   
 0.592
OSY42141.1
Glycosyl hydrolases family 16.
  
     0.566
OSY35045.1
Glycosyl hydrolases family 16.
 
   
 0.557
OSY42939.1
Glycosyl hydrolases family 16.
 
   
 0.551
OSY41330.1
Hypothetical protein.
  
  
 0.550
OSY42209.1
Hypothetical protein.
  
     0.546
OSY41765.1
Glycosyl hydrolases family 16.
 
   
 0.532
OSY38102.1
Glycosyl hydrolases family 16.
 
   
 0.527
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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