STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pobB_7Phenoxybenzoate dioxygenase subunit beta. (321 aa)    
Predicted Functional Partners:
thcB
Cytochrome P450 116.
 
 0.929
OSY42804.1
Cytochrome P450 107B1.
 
 0.850
YjiB
Cytochrome P450 130.
 
 0.826
OSY43336.1
Cytochrome P450 107B1.
 
 0.811
OSY40780.1
Cytochrome P450 107B1.
 
 0.811
OSY40747.1
Cytochrome P450-terp.
 
 0.808
OSY35899.1
Pentalenic acid synthase; Belongs to the cytochrome P450 family.
 
 0.796
eryF_1
6-deoxyerythronolide B hydroxylase; Belongs to the cytochrome P450 family.
 
 0.786
Cyp124
Putative cytochrome P450 124.
 
 0.748
vdh
Vitamin D(3) 25-hydroxylase; Hydroxylates vitamin D(3) into 25-hydroxyvitamin D(3) and 1- alpha,25-dihydroxyvitamin D(3), its physiologically active forms. It first hydroxylates the C-25 position of vitamin D(3) to form 25- hydroxyvitamin D(3), then subsequently hydroxylates the C-1-alpha position to form 1-alpha,25-dihydroxyvitamin D(3). Also displays 25- hydroxylase activity on vitamin D(2) and 7-dehydrocholesterol. May play a role in the biosynthesis of steroid metabolic intermediates. Belongs to the cytochrome P450 family.
 
 0.741
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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