Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY34841.1 | OSY36119.1 | BG845_06472 | BG845_05634 | B12 binding domain protein. | Hypothetical protein. | 0.689 |
OSY34841.1 | rsbU | BG845_06472 | BG845_06471 | B12 binding domain protein. | Phosphoserine phosphatase RsbU. | 0.978 |
OSY36119.1 | OSY34841.1 | BG845_05634 | BG845_06472 | Hypothetical protein. | B12 binding domain protein. | 0.689 |
OSY36119.1 | OSY37950.1 | BG845_05634 | BG845_04357 | Hypothetical protein. | Hypothetical protein. | 0.463 |
OSY36119.1 | OSY43091.1 | BG845_05634 | BG845_00696 | Hypothetical protein. | Pyridoxamine 5'-phosphate oxidase. | 0.591 |
OSY36119.1 | OSY43128.1 | BG845_05634 | BG845_00733 | Hypothetical protein. | Hypothetical protein. | 0.445 |
OSY36119.1 | OSY43989.1 | BG845_05634 | BG845_00109 | Hypothetical protein. | Hypothetical protein. | 0.467 |
OSY36119.1 | bmr3_5 | BG845_05634 | BG845_05633 | Hypothetical protein. | Multidrug resistance protein 3. | 0.538 |
OSY36119.1 | kce_1 | BG845_05634 | BG845_00537 | Hypothetical protein. | 3-keto-5-aminohexanoate cleavage enzyme. | 0.461 |
OSY36119.1 | rsbU | BG845_05634 | BG845_06471 | Hypothetical protein. | Phosphoserine phosphatase RsbU. | 0.650 |
OSY36119.1 | smc_5 | BG845_05634 | BG845_03893 | Hypothetical protein. | Chromosome partition protein Smc. | 0.449 |
OSY36119.1 | smc_6 | BG845_05634 | BG845_04672 | Hypothetical protein. | Chromosome partition protein Smc. | 0.431 |
OSY37950.1 | OSY36119.1 | BG845_04357 | BG845_05634 | Hypothetical protein. | Hypothetical protein. | 0.463 |
OSY37950.1 | smc_6 | BG845_04357 | BG845_04672 | Hypothetical protein. | Chromosome partition protein Smc. | 0.772 |
OSY43091.1 | OSY36119.1 | BG845_00696 | BG845_05634 | Pyridoxamine 5'-phosphate oxidase. | Hypothetical protein. | 0.591 |
OSY43128.1 | OSY36119.1 | BG845_00733 | BG845_05634 | Hypothetical protein. | Hypothetical protein. | 0.445 |
OSY43989.1 | OSY36119.1 | BG845_00109 | BG845_05634 | Hypothetical protein. | Hypothetical protein. | 0.467 |
OSY43989.1 | smc_6 | BG845_00109 | BG845_04672 | Hypothetical protein. | Chromosome partition protein Smc. | 0.495 |
bmr3_5 | OSY36119.1 | BG845_05633 | BG845_05634 | Multidrug resistance protein 3. | Hypothetical protein. | 0.538 |
kce_1 | OSY36119.1 | BG845_00537 | BG845_05634 | 3-keto-5-aminohexanoate cleavage enzyme. | Hypothetical protein. | 0.461 |
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