STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY35981.1Putative endoglucanase. (208 aa)    
Predicted Functional Partners:
OSY35031.1
Putative endoglucanase.
 
     0.976
OSY35983.1
Hypothetical protein.
 
   
 0.932
OSY35982.1
Hypothetical protein.
       0.773
OSY42353.1
Hypothetical protein.
   
 
 0.762
OSY42736.1
Hypothetical protein.
 
     0.732
OSY35979.1
Site-specific tyrosine recombinase XerC.
       0.530
xerD_5
Tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
       0.530
gnl
Gluconolactonase precursor.
 
     0.472
OSY39909.1
Hypothetical protein.
  
     0.451
yitD
Phosphosulfolactate synthase.
  
     0.447
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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