Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY35214.1 | linB | BG845_06188 | BG845_05814 | Fluoroacetate dehalogenase. | Haloalkane dehalogenase. | 0.632 |
OSY40717.1 | linB | BG845_02475 | BG845_05814 | Protochlorophyllide oxidoreductase. | Haloalkane dehalogenase. | 0.579 |
OSY40794.1 | linB | BG845_02552 | BG845_05814 | Soluble epoxide hydrolase. | Haloalkane dehalogenase. | 0.640 |
OSY41824.1 | linB | BG845_01853 | BG845_05814 | Soluble epoxide hydrolase. | Haloalkane dehalogenase. | 0.618 |
acuR | linB | BG845_05813 | BG845_05814 | Transcriptional regulator AcuR. | Haloalkane dehalogenase. | 0.800 |
adhD_3 | adhT_2 | BG845_04985 | BG845_04947 | Putative alcohol dehydrogenase D. | Alcohol dehydrogenase. | 0.944 |
adhD_3 | dhaT_1 | BG845_04985 | BG845_00095 | Putative alcohol dehydrogenase D. | 1,3-propanediol dehydrogenase. | 0.928 |
adhD_3 | flhA | BG845_04985 | BG845_04162 | Putative alcohol dehydrogenase D. | S-(hydroxymethyl)glutathione dehydrogenase. | 0.910 |
adhD_3 | linB | BG845_04985 | BG845_05814 | Putative alcohol dehydrogenase D. | Haloalkane dehalogenase. | 0.911 |
adhD_3 | qedA | BG845_04985 | BG845_04198 | Putative alcohol dehydrogenase D. | Quinoprotein ethanol dehydrogenase precursor. | 0.908 |
adhT_2 | adhD_3 | BG845_04947 | BG845_04985 | Alcohol dehydrogenase. | Putative alcohol dehydrogenase D. | 0.944 |
adhT_2 | dhaT_1 | BG845_04947 | BG845_00095 | Alcohol dehydrogenase. | 1,3-propanediol dehydrogenase. | 0.943 |
adhT_2 | flhA | BG845_04947 | BG845_04162 | Alcohol dehydrogenase. | S-(hydroxymethyl)glutathione dehydrogenase. | 0.943 |
adhT_2 | linB | BG845_04947 | BG845_05814 | Alcohol dehydrogenase. | Haloalkane dehalogenase. | 0.909 |
adhT_2 | qedA | BG845_04947 | BG845_04198 | Alcohol dehydrogenase. | Quinoprotein ethanol dehydrogenase precursor. | 0.911 |
dhaT_1 | adhD_3 | BG845_00095 | BG845_04985 | 1,3-propanediol dehydrogenase. | Putative alcohol dehydrogenase D. | 0.928 |
dhaT_1 | adhT_2 | BG845_00095 | BG845_04947 | 1,3-propanediol dehydrogenase. | Alcohol dehydrogenase. | 0.943 |
dhaT_1 | flhA | BG845_00095 | BG845_04162 | 1,3-propanediol dehydrogenase. | S-(hydroxymethyl)glutathione dehydrogenase. | 0.928 |
dhaT_1 | linB | BG845_00095 | BG845_05814 | 1,3-propanediol dehydrogenase. | Haloalkane dehalogenase. | 0.901 |
dhaT_1 | qedA | BG845_00095 | BG845_04198 | 1,3-propanediol dehydrogenase. | Quinoprotein ethanol dehydrogenase precursor. | 0.908 |
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